Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0420 ATGGTAAGGCTTGATAGAGAAGGAACAAACAAGAGCTTAGAGAGTTTACTGGAGTTGAGCAAGATTGAGACGACGACGACAGCGAAGAAGCAGCTGAGAGCGCAGAAGTCGATTCCTGGGTATGGGTTGGAGTTCAATAATCTGTCGTATAGTGTGGTGAAGAAGGTGAAGAAAGATGGGGCTTGGGTGAAGAAAGAGGCTTATCTTCTTCATGATATATCTGGGCAAGCCATGAGAGGTGAAGTTATGGCCATCATGGGACCTAGCGGTGCAGGTAAGTCGACTTTTCTTGATGCTTTGGCTGGTCGAATTGCTCAAGGCAGCTTGGAAGGATCTGTCAGAATTGATGGAAAACCAGTGACAACGAGTTACATGAAGATGGTGTCGTCTTATGTAATGCAAGATGATCAGTTGTTTCCTATGTTGACTGTTTTTGAGACATTCATGTTTGCAGCTGAGGTTAGGCTTCCCCCTTCTATCTCCAGAGAGGAAAAGAAGAAGAGGGTTTATGAGCTCCTTGATCAGCTTGGCTTGCAGAGTGCAACACATACATATATTGGTGATGAGGGGACGAGAGGAGTGTCAGGAGGAGAAAGACGAAGGGTGTCCATTGGCATAGACATAATACATAAGCCATCACTTCTGTTTCTTGATGAACCAACCTCAGGTCTTGATTCCACCAGTGCTTTTAGTGTCGTCGAAAAGGTTAAGGACATTGCTCGAGCTGGAAGCATCGTCCTCATGACCATTCATCAGCCTTCCTACAGAATCCAAATGCTCCTCGACCGTCTCACCATCCTCGCAAGGGGAAGATTGATATACATGGGAAAGCCAAGTGCAGTTGCAGATCATCTTTCTGGGTTTGGAAGACCAGTACCTGATGGAGAGAACAGTTTAGAGAATCTTTTAGATGTCATCAAAGAATTCGACGAATCCAACGTTGGACTCGACCCACTTGTTTTCTACAATCGTGATGGTCTGAAACCTGAACAATTAGCCCAGACACCAATTGTGAAAACTCCAAGAACAATTTATAAAAAGAGCAACAACACACCTGCTTCAAAGCACATGATTAGCCTCAAAAGCCAAGGCTTCAAAGCTGGAACAACTACACAGCCTGCAGATTCTGCACAGTTTAGTTATAACATTCATGGTGATCATGACGAAGATGACGACGACGATGACGGGGATTTCGATAACTCTCTTGAAAGGAGAAGTACCGTTCACACCCCTAGGGCTAATACCATGACTAGTGGTGTTTATCCTCGTTTGGCTTCTCAGTTTTATAAGGATTTCTCTGCCAAAGATTTCTCTGTTTGGGTTTACCATGGTGTGGTCGGAACCCCTCGTCGTCCGTCATGGACTCCGGCGAGAACACCGGGTTTGACGCCGGCGAGAACTCCGATGTCTGGAACAAGAAGGACCGTTTTCAACCAGTATTCGGCATCATATGAGGAGCCTTACCATCATCATCATGCCAAAACACCATCTATGGTTAGTCAATCCATTGCCTTGGACTCGTACGTAAGTTCGTACTCGGAATTCGACATTGAAGTTCTTGATGAACCCAACGTTGGATCAAAGTACGCTAATCCATGGCTTCGTGAAGTTGCAGTGCTTTCATGGCGAACAGCTCTAAACGTGATTCGAACTCCAGAACTGTTCCTTTCTCGTGAGATTGTTCTAACTGTAATGGCCCTCGTTCTCTCCACCATCTTCAAAAACCTAAGCCACCCAACTTTCAAGGACATTAACAGAATTCTCAACTTCTACATCTTCTCTGTCTGCCTAGTCTTTTTCTCTTCAAACGACGCCGTTCCGTCTTTCATCCTCGAGAGATTCATCTTCATCAGAGAAACTTCCCACAATGCTTACCGTGCTTCTTCATACGTGATCTCTTCACTGATCGTTTATCTCCCATTTTTCGCAGTCCAGGGCCTCACTTTTGCTCTCATAACCAAATTCATGCTTCACCTGAAAAGCAGTCTCTTCTATTTCTGGTTGATTCTTTATGCTTCTCTGATCACAACCAATGCTTACGTCATGTTAGTTAGTGCTCTTGTTCCTAGTTATATCACAGGTTATGCGGTGGTGATTGCTACAACGGCTTTATTCTTTCTCACTTGTGGCTTCTTCCTCAAGAGAACTCAGATTCCTGATTACTGGAAATGGCTTCATTATATTTCTGCAATTAAGTATCCGTTTGAAGCTTTGTTGACGAATGAGTTTAAGAATGAACGGTGCTACACAGGGAGCTTATCGGAATTGTCGCCGGGGCCGTTGGGAGAAGTGAAGCAGAGTGAAGGACATGACCGGTCCAAGTGTCCGATCGGATTGATCGGAGAAGATGTTTTGGCCACCATGGATATTGAGATAGAGAAGATTTGGTTTGATATAGTTATCCTTCTGGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTATTTGGTTTTGAGATTTTATTCTAAGAATGAGAGGAACAGATATTTTCCCGATTCTCTCTCTCTCTCAGTTCACACAGGGTCTTTTTCCCGACGCAATTTTCAGTTTCAATTTCTTCATCTTCAATGTGGCTCTCCGCAGTCCTGCACCTATGCTAGGGCTGCGCTCATTTCCTGA 2616 0.445 MVRLDREGTNKSLESLLELSKIETTTTAKKQLRAQKSIPGYGLEFNNLSYSVVKKVKKDGAWVKKEAYLLHDISGQAMRGEVMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISREEKKKRVYELLDQLGLQSATHTYIGDEGTRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAFSVVEKVKDIARAGSIVLMTIHQPSYRIQMLLDRLTILARGRLIYMGKPSAVADHLSGFGRPVPDGENSLENLLDVIKEFDESNVGLDPLVFYNRDGLKPEQLAQTPIVKTPRTIYKKSNNTPASKHMISLKSQGFKAGTTTQPADSAQFSYNIHGDHDEDDDDDDGDFDNSLERRSTVHTPRANTMTSGVYPRLASQFYKDFSAKDFSVWVYHGVVGTPRRPSWTPARTPGLTPARTPMSGTRRTVFNQYSASYEEPYHHHHAKTPSMVSQSIALDSYVSSYSEFDIEVLDEPNVGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALVLSTIFKNLSHPTFKDINRILNFYIFSVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFALITKFMLHLKSSLFYFWLILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPDYWKWLHYISAIKYPFEALLTNEFKNERCYTGSLSELSPGPLGEVKQSEGHDRSKCPIGLIGEDVLATMDIEIEKIWFDIVILLAWGVLYRFFFYLVLRFYSKNERNRYFPDSLSLSVHTGSFSRRNFQFQFLHLQCGSPQSCTYARAALIS 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0420 871 MobiDBLite consensus disorder prediction 380 416 - -
Lele46g0420 871 Pfam ABC transporter 70 222 IPR003439 GO:0005524
Lele46g0420 871 CDD ABCG_EPDR 43 276 - -
Lele46g0420 871 FunFam ABC transporter G family member 6 58 285 - -
Lele46g0420 871 Gene3D - 42 288 IPR027417 -
Lele46g0420 871 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 813 - -
Lele46g0420 871 SMART AAA_5 79 279 IPR003593 -
Lele46g0420 871 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 285 IPR027417 -
Lele46g0420 871 ProSitePatterns ABC transporters family signature. 194 208 IPR017871 GO:0005524|GO:0016887
Lele46g0420 871 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 294 IPR003439 GO:0005524
Lele46g0420 871 Pfam ABC-2 type transporter 537 743 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0420 Lele-ChrLele46 2832677 2837579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0420 80 276 Calmodulin-binding Proteins AT2G36910 25.500 4.12e-08 55.5