Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0417 ATGATAATGCTGCTTCATAAACTGTCCATTTTGCTCAGTTTCTTCCTGGTTTTGCTTCCTCTGGTTAGACCAGATCTGTCTTCTGAGAGACTCGCTCTCGTTTCTCTCCGTTCGGCCGTCGGAGGCCGAACCCTTTTCTGGAACGTTTCTGAGCAGAGTCCATGCAAGTGGTTCGGAGTCCAGTGCGAAAACGACCGTGTCATCCAGCTTCGTCTTCCCGGCGTTGCGCTTTCCGGCTCAATTCCCACCGGCATTTTCGGCAACTTGACTCTTCTTCGAACTCTGAGCTTGCGTTTCAATGCTTTGAAAGGTGTGCTTCCGGAAGATCTCGCTTCTTGCGTTAATCTTCGTAACGTTTACTTGCAGCAGAATCTTCTCTCCAGTGAAATTCCAGATTTCCTGTTTGCTTTACCGGACTTGGTCCGGCTTAATTTGGCGTCCAACAATTTTTCCGGCTCAATTCCGTTGGGTTTCAACAATTTGACGAGGCTGAGAACTTTGTTCCTTGAAAACAACAATCTCTCAGGTGCCATCCCCAAGTTAAACCTTGTAAACCTTGAACAATTCAATGTTTCAAACAATATGCTGAATGGTTCAGTGCCAGAAAAGTTACAAACTTTCGCCAAAGATTCATTTCTAGGGACCTCCCTATGTGGGAAACCCCTCAATCTTTGTCCAGGAGACGTAAATGGACCCGGAACCGGAAGCGGAACCAGAGCCGGAACTGGAACGGGAAAATCTCCGACTCCTGAGATTGTAAACAATGAGAGAAACATGAAGAAGAAGAAGAAACTGTCAGGTGGTGCCATTGCCGGAATCGTTGTAGGATCAGCAGTGTGTCTTCTGTTGATTCTTTTCGCTCTGATCATATTATGCCGAAAGAGCAGTAATCAGAAGACAAGGTCGCTGGACTTTTTAACTGAGAAGCATCTCGAAGTGCCAATTCGAGGCGACAAACGGGTTTCAGAACTGGAACACAGTAATGCCTACTTGGCTGCTGCGGGGGAAACTGCGGCGGCGGCGACGACGGAGAACGTCGCCGGAGCGAAAAAGCTGGTATTTTTTGGACATTCACAGGTGTTTGATCTTGAGGATTTGCTTAGGGCTTCTGCAGAAGTTTTGGGCAAAGGAACATTTGGAACAGCCTATAAGGCGACTCTTGAGGATGGGCCTGTGGTGGCGGTGAAGCGATTGAGGGACGTGAGGATTTCTGAAACAGAGTTGAAGGAGAAGATTGAAGCAGTAGGAACAATGAATCATGAGAATTTGGTTCCTCTCATGGCTTACTATTATAGCGGAGAAGAAAAGCTTCTTGTTTATGATTACATTCCCACAGGAAGTTTATCTGCACTTCTGCATGGAAACAAAGGGGCTGGTAGGAGCCCACTGAATTGGGAAGCGAGATCAGTCATTGCTCTTGGAGCTGCTAGAGGCATTGAGTACATTCACTCACAAGGGACTAATTTTTCTCATGGAAATGTAAAATCATCCAACATCCTCCTCACCAGATCCTTGGACGCTAAAGTATCCGACTTTGGCCTCGCGCACCTCGCCAGTCCCACCTCCACTCCAAACCGAGTCATCGGGTACCGTGCTCCTGAGGTAACTGATCCTCGCAAGGTATCTCAGAAGGCGGATGTCTATAGCTTTGGAGTATTGCTCTTGGAATTGCTTACCGGGAAGGCCCCGGCCCACGCACTCTTGAATGATGAAGGAGTAGACCTACCTAGATGGGTTCAATCTGTTGTCAGAGAAGAGTGGACCTCCGAGGTGTTCGATCTCGAGCTTCTCAGGTATCAGAATGTCGAGGAGGAGATGGTTCAATTGTTGCAACTCGCAGTTGATTGTGTCGCTCCGTACCCTGATAATCGCCCATCGATGTCAGAAGTAACGAAGCGAATTGAAGAGTTACGAGAGGCTAGCTTGAAACGTGGTCAAGACCGAATCCAAAATCCTGACCCGATCGATGATATATCTTCTCACTGA 1986 0.4768 MIMLLHKLSILLSFFLVLLPLVRPDLSSERLALVSLRSAVGGRTLFWNVSEQSPCKWFGVQCENDRVIQLRLPGVALSGSIPTGIFGNLTLLRTLSLRFNALKGVLPEDLASCVNLRNVYLQQNLLSSEIPDFLFALPDLVRLNLASNNFSGSIPLGFNNLTRLRTLFLENNNLSGAIPKLNLVNLEQFNVSNNMLNGSVPEKLQTFAKDSFLGTSLCGKPLNLCPGDVNGPGTGSGTRAGTGTGKSPTPEIVNNERNMKKKKKLSGGAIAGIVVGSAVCLLLILFALIILCRKSSNQKTRSLDFLTEKHLEVPIRGDKRVSELEHSNAYLAAAGETAAAATTENVAGAKKLVFFGHSQVFDLEDLLRASAEVLGKGTFGTAYKATLEDGPVVAVKRLRDVRISETELKEKIEAVGTMNHENLVPLMAYYYSGEEKLLVYDYIPTGSLSALLHGNKGAGRSPLNWEARSVIALGAARGIEYIHSQGTNFSHGNVKSSNILLTRSLDAKVSDFGLAHLASPTSTPNRVIGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPAHALLNDEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCVAPYPDNRPSMSEVTKRIEELREASLKRGQDRIQNPDPIDDISSH 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0417 661 FunFam pollen receptor-like kinase 1 338 442 - -
Lele46g0417 661 Gene3D Phosphorylase Kinase; domain 1 336 442 - -
Lele46g0417 661 FunFam Probable inactive receptor kinase At1g48480 443 645 - -
Lele46g0417 661 PANTHER OS05G0588300 PROTEIN 10 644 - -
Lele46g0417 661 MobiDBLite consensus disorder prediction 235 251 - -
Lele46g0417 661 ProSiteProfiles Protein kinase domain profile. 368 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0417 661 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Lele46g0417 661 Gene3D Ribonuclease Inhibitor 31 136 IPR032675 -
Lele46g0417 661 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Lele46g0417 661 MobiDBLite consensus disorder prediction 641 661 - -
Lele46g0417 661 Gene3D Ribonuclease Inhibitor 139 225 IPR032675 -
Lele46g0417 661 MobiDBLite consensus disorder prediction 231 251 - -
Lele46g0417 661 SUPERFAMILY L domain-like 40 206 - -
Lele46g0417 661 SUPERFAMILY Protein kinase-like (PK-like) 372 634 IPR011009 -
Lele46g0417 661 Gene3D Transferase(Phosphotransferase) domain 1 443 655 - -
Lele46g0417 661 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Lele46g0417 661 Pfam Protein kinase domain 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0417 Lele-ChrLele46 2814533 2817257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0417 25 653 Receptor kinase-like Gene Family AT1G48480 61.224 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele46g0417 Pkinase 3.8e-39 CL0016