Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0405 ATGCTTGGACATGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCGCTATCATGTTACTGAGTATCTGGGATCTGCTGCGTTCAGCAAAGCCATACAAGCTCATGAATTGCATACAGGCATGGATGTTTGTGTTAAAATAATAAAGAACAACAAGGACTTCTTTGACCAAAGCCTTGACGAGATTAAGCTTCTCAATTCTTACTTGAAGTTAATTGCTGTTTCAGAATCTGATACACTGGTGTTTAAGTTCAAAATAAATTCTGTTACATTATCGGGTCTAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCCAACTTATATGAGTTTCATAAATTTAATAGAGAGTCAGGGGGCGAAGTATACTTCACAATGCCAAGATTGCAGTCAATTACAATTCAGTGTTTGGAAGCCCTGCAGTTTTTGCACAGCCTTGGACTAATACATTGTGACCTGAAGCCAGAGAATATTTTGGTGAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGGAGCAGTTGTTATGAGACTGATCACCTTTGCTCATATGTCCAGTCCAGGTCCTATCGTGCTCCTGAGGTTATATTGGGACTTCCATATGACAAGAAGATTGATATCTGGTCACTTGGCTGCATTTTGGCAGAACTTTGTACTGGCAACGTCCTCTTTCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGCATCATCGGTCCAATTGATCAAAGTATGCTCACAAAAGGAAGGGATACATTTAAGTACTTCACCAAAAATCATATGCTTTATGAACGGAATCAGGAAGCCAACAGGTTAGAATACTTGATTCCCAAGAAGACATCTTTAAGGCATAGATTGCCAATTGGAGACCAAGGCTTCATTGATTTTGTTGCTTATTTGCTTGAGGTTAACCCAAAGAAGCGGCCTTCCGCTACCGAGGCCCTTAAGCATCCATGGTTATCATACCCTTACGAACCCATATCATCTTGA 1011 0.3956 MLGHDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHELHTGMDVCVKIIKNNKDFFDQSLDEIKLLNSYLKLIAVSESDTLVFKFKINSVTLSGLEHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCYETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLTKGRDTFKYFTKNHMLYERNQEANRLEYLIPKKTSLRHRLPIGDQGFIDFVAYLLEVNPKKRPSATEALKHPWLSYPYEPISS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0405 336 SUPERFAMILY Protein kinase-like (PK-like) 8 329 IPR011009 -
Lele46g0405 336 FunFam Serine/threonine-protein kinase ppk15 104 328 - -
Lele46g0405 336 Gene3D Transferase(Phosphotransferase) domain 1 74 327 - -
Lele46g0405 336 Gene3D Phosphorylase Kinase; domain 1 14 106 - -
Lele46g0405 336 PANTHER DUAL SPECIFICITY PROTEIN KINASE 5 327 - -
Lele46g0405 336 SMART serkin_6 20 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0405 336 ProSiteProfiles Protein kinase domain profile. 20 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0405 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lele46g0405 336 Pfam Protein kinase domain 20 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0405 336 CDD PKc_DYRK_like 20 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0405 Lele-ChrLele46 2736585 2740339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0405 26 328 MAP Kinase Gene Family AT4G01370 28.571 2.09e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lele46g0405 Pkinase 4.1e-47 CL0016