Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0399 ATGGAGGGGGATAATGGTCTTGACATACGAAATTGGGGTTACTATGAACCCACAACTTCCTTTAAGAATCATCTCGGACTCCAGCTGTCCTCCGTGCCTGAAAAACCCATGCTTGGAGGGCGCAATGCTGCTGTTTTGTCTGGAAACAATGTGGCATTTCACCATAGGACCGTTGGTATGGCACAAGCAACTTACCCTATGGAATACATGAGGGAAGCTTGGATTAGTCAAAGAGAGAAGTTTTTGAACATGATTCCGGCAAACCCAACAAACTTTGCTGCTGTTATTCCAGAGACATCTTCAGCCCATCACATGCAGTTGGTTCCACCGCCTGACTTGGTGAAGGAAGAAAGACTGGTGGAAGAGGCACCCGTTGAGAAGATCAATGGCACTAGTAAGAAAAGGCAGGGTCCACCCAAGGTACCCAAAGCTCCCAAGGCGAAAAAGCCCAAGAGAGGACCTCGTGCGCCGAAGGATGAGAATACTCTTTCTGTTCAACGGGCAAGGTCAGCAAAGAAGACTACTGAAGTTGTGATAAATGGGATCGATATGGATATCTCGAGTATTCCTATTCCAGTTTGTTCATGCACTGGGATGCCTCAACAGTGTTACAGATGGGGTTCTGGTGGGTGGCAATCTGCTTGTTGCACAACAAATATGTCAATCTATCCATTGCCGATGAGTACGAAGCGGCGTGGCGCTAGGATAGCTGGGAGAAAAATGAGTATAGGAGCATTTAAGAAAGTCTTAGAGAAACTTGCCGCTGAGGGTTATAACTTCTCTAATCCGATCGATTTGAAGACTTATTGGGCAAAACATGGCACTAACAAGTTTGTCACTATCAGGTAG 849 0.4629 MEGDNGLDIRNWGYYEPTTSFKNHLGLQLSSVPEKPMLGGRNAAVLSGNNVAFHHRTVGMAQATYPMEYMREAWISQREKFLNMIPANPTNFAAVIPETSSAHHMQLVPPPDLVKEERLVEEAPVEKINGTSKKRQGPPKVPKAPKAKKPKRGPRAPKDENTLSVQRARSAKKTTEVVINGIDMDISSIPIPVCSCTGMPQQCYRWGSGGWQSACCTTNMSIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0399 282 PANTHER - 1 282 IPR010409 -
Lele46g0399 282 SMART GAGA_bind_2 1 282 IPR010409 -
Lele46g0399 282 MobiDBLite consensus disorder prediction 122 169 - -
Lele46g0399 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0399 Lele-ChrLele46 2682174 2683022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0399 4 282 BBR or BPC Transcription factor family AT2G01930 50.853 1.75e-96 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele46g0399 GAGA_bind 6.9e-105 No_clan