LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele46g0391	ATGGCAGCCTTGTTTGGTTTTGGGAGGGACGAGAAAGGAGCACGGAGCACAGCACCAATGGCTCAGGCGCAGCCAATCGAACAAGTCCAATGTTTCGGCCGTAAGAAGACCGCCGTCGCTGTGACTCACTGCAAGCGCGGCCGTGGACTCATCAAGATCAATGGCACTCCGATTGAACTTGTGCAGCCGGAGATTCTTCGATTCAAAGCCTTCGAACCAATCCTCCTGCTCGGAAAACACCGTTTCGCCGGCGTAGACATGCGTATCAGAGTCAAGGGCGGTGGTCACACCTCTCAGATATACGCTATTCGCCAAAGTATAGCCAAAGCTCTCGTTGCTTTCTACCAGAAGTACGTGGACGAGCAGAGTAAGAAGGAGATCAAGGATATTCTTGTTAGGTACGATCGAACGCTGTTGGTCGCTGATCCTAGGCGTTGCGAGCCCAAGAAATTTGGTGGTCGTGGTGCTCGTGCCAGGTTCCAGAAATCTTACCGTTGA	498	0.5261	MAALFGFGRDEKGARSTAPMAQAQPIEQVQCFGRKKTAVAVTHCKRGRGLIKINGTPIELVQPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR	165

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele46g0391	165	Gene3D	-	20	165	IPR014721	-
	Lele46g0391	165	PANTHER	RIBOSOMAL PROTEIN S9	22	162	IPR000754	GO:0003735\|GO:0005840\|GO:0006412
	Lele46g0391	165	SUPERFAMILY	Ribosomal protein S5 domain 2-like	28	165	IPR020568	-
	Lele46g0391	165	Pfam	Ribosomal protein S9/S16	33	165	IPR000754	GO:0003735\|GO:0005840\|GO:0006412
	Lele46g0391	165	MobiDBLite	consensus disorder prediction	1	21	-	-
	Lele46g0391	165	FunFam	40S ribosomal protein S16	21	165	-	-
	Lele46g0391	165	ProSitePatterns	Ribosomal protein S9 signature.	93	111	IPR020574	GO:0003735\|GO:0005840\|GO:0006412

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele46g0391	Lele-ChrLele46	2603333	2604617	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele46g0391	20	165	Cytoplasmic Ribosomal Protein Gene Family	AT2G09990	88.356	4.22e-94	267

Showing 1 to 1 of 1 entries