LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele46g0374	ATGGATGAGTATCAAGAGATGGAGAGATTTGGTATGGATAATGATTTTGAAGGTGGTGAATGGATTGGTGGTGAGTTCTACTATCGAAAGCACAAAGAGAAACGCACTCAAACCAGAGAAGATGTTCTTTATGGGGTGTTTGCAGACTCTGATGATGATGAAGATGATTATTCAAACAGAAAACGTAGAAAAGATCGTGACTTATCTAAGAAGCCTGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGAACTTTTATGCCTAATCAAGATGATAACCGTTCTAAAGAACAGATTGAAGAAGAAAATTATACTAGTGAGGACAGGCCAGTTTTAGGTCTTGGCATGGGAACTACTAACACTTCTAGTTCTGGGTTAGGTTTTAATACTATTCATCGTGAAAATGCTTCTGATGAAGATAATGGTGATGACGGTTTTCTGCCTACAGCATTTGGAAAGAAGATTAAGGAGGGAGCAATGAGAAGGGAGAGGGAAAAGGAGAGAGCAAAATTGGAAAAGAAGAGAGCTCAAGGAAAAGCTCAAGCTCAAGATGGATTTTCAGATGTTGGGAAGTTTGAGAAGCATACTAAGGGGATCGGAATGAAGTTGTTGGAGAAGATGGGTTATAAAGGAGGTGGTCTTGGGAGGAATGAACAAGGTATTGTTGCTCCTGTTGAGGCTCATTTGAGGGCCAAGAATACAGGCATTGGATTTAATGACTTGAAGGGAACAACTCCTTTGCCAAGTGTTCAAGTTGAGAAGACAGCATTGCCTGGAGTTGCTCAACCTACAGCTGTTAGAGCAAAGGAAAGGTTGTGGTCAAAGCAATCAAGGTCAAAGAAGAAGAAAGATGAGGATGATTATATTACTGCTGAGGAATTGTTAGCAAGCAATCAAGAACAGGGTCTGGAGGTCGTTCAGAAGGTTTTTGATATGAGAGGGCCACTGGTACGAGTAATTACGAATTTGTCTGATTTGAATGCCGAGGAGAAAGCTAAGGAAAATGATATTCCAATGCCAGAGCTTCAGCATAACGTGGGGTTAATTGTTAGGTTGGCTGAAGCAGACATCCAAGAAATTGATAGAAAATTGAGGGGAGAGAGGGAGACAGCACTCAGCTTGAAAAAAGAAAAAGAGAAGTTAGAAACTGAGGTAGCACACCAAAAAAAGCAGTTGCAAGATTTGGAGGAAATAGAAAGTGTGCTGGACCGAGTTGGAAAAGAGAATTCAACGGGGACATTGACATTGGATTTGCTTGCACAGTGCTTTGCTGACCTGCGGAAAAGATACGCTGATAGCTACAAGTTGTGTAACTTGTCATGTATTGCTTCCTCATATGCTTTGCCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCTCTTCAAAATCCATCACATGGGTTAAAGTTGGTGTCACGGTGGAAAACATTGCTTCAAGAAGAAGATTGCCTTGATATCTGGGATGTAACATCACCTTATACTCAATTGATTTCTGAAGTTGTATTACCAGCTGTCAGGATTTCAGGTATCAATACTTGGCAGGCACGGGATCCTGAGCCCATGTTACGGTTTTTGGAGTCATGGGAAAAGTTGCTTCCTTCTTCAGTTCTCACAACTATGTTGGAGAATATAATCATGCCAAAATTGGCCAGTGCTGTAGATACATGGGAACCGCATCGTGAGACAATTCCTATTCATACTTGGGTGCACCCATGGTTACCTTTGTTAGGACATAAGTTAGAGGGCATGTATCAGATGATACGCTTCAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGCGATGGCTCTGCTTATGCTATATTGTCACCTTGGAAGACCATATTTGATTCAGTGAGTTGGGAACAGCTTATGCTTCGATTTATTGTGCCTAAGTTGCAGCTTGTCCTGCAAGAGTTCCAAGTGAACCCAGCAGATCAGAAGCTTGATCAATTTTATTGGGTGATGAATTGGGCTTCTGCTGTCCCAATTCATCTGATGGTTGATCTAATGGAAAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCTAACCCTAACTTTGAAGAAGTTACAAAATGGTACTTGGGCTGGAAAGAACTTATTCCAATGGAACTTTTGGCTAATGAAAGTATTCGATATCAGTTAAACCGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGCTTGAAAGAAAATATCAGTTATCTTAGGGTACTTGAGCAAAGGCAGTTTGAGGCTCAGCAGAAAGCAGCAGCTCATGCTCAAGCCCAAGCGCCTTCAGGCTTGGGGAGTGCTGCCCATATGGATGGTGCCGCTGGCGTACATGAGATGAGCTTAAAGGAAGTCATTGAGGCCCATGCCCAACAACATGGTTTGCTATTCAAGCTTAAACCTGGCAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGTCAGCATTATAATAGATTCTCTAAATCAAAAGGTATATGCCCAAACTGAGGATGCGTGGGCTTTGGAATCTCTCCAAGGCTTACTGGAGCTGCATAATAAATCCCTTGGTCGGAGACGATGA	2598	0.4211	MDEYQEMERFGMDNDFEGGEWIGGEFYYRKHKEKRTQTREDVLYGVFADSDDDEDDYSNRKRRKDRDLSKKPDLTKPVNFVSTGTFMPNQDDNRSKEQIEEENYTSEDRPVLGLGMGTTNTSSSGLGFNTIHRENASDEDNGDDGFLPTAFGKKIKEGAMRREREKERAKLEKKRAQGKAQAQDGFSDVGKFEKHTKGIGMKLLEKMGYKGGGLGRNEQGIVAPVEAHLRAKNTGIGFNDLKGTTPLPSVQVEKTALPGVAQPTAVRAKERLWSKQSRSKKKKDEDDYITAEELLASNQEQGLEVVQKVFDMRGPLVRVITNLSDLNAEEKAKENDIPMPELQHNVGLIVRLAEADIQEIDRKLRGERETALSLKKEKEKLETEVAHQKKQLQDLEEIESVLDRVGKENSTGTLTLDLLAQCFADLRKRYADSYKLCNLSCIASSYALPLFIRVFQGWDPLQNPSHGLKLVSRWKTLLQEEDCLDIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTTMLENIIMPKLASAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSTVLGAWHPSDGSAYAILSPWKTIFDSVSWEQLMLRFIVPKLQLVLQEFQVNPADQKLDQFYWVMNWASAVPIHLMVDLMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPMELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAHAQAQAPSGLGSAAHMDGAAGVHEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQTEDAWALESLQGLLELHNKSLGRRR	865

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele46g0374	865	MobiDBLite	consensus disorder prediction	93	107	-	-
	Lele46g0374	865	PIRSF	TFIP11	1	860	IPR024933	-
	Lele46g0374	865	Pfam	Tuftelin interacting protein N terminal	6	104	IPR022159	-
	Lele46g0374	865	PANTHER	TUFTELIN-INTERACTING PROTEIN 11-RELATED	1	852	IPR045211	GO:0000390
	Lele46g0374	865	Coils	Coil	350	398	-	-
	Lele46g0374	865	Pfam	GC-rich sequence DNA-binding factor-like protein	417	683	IPR022783	-
	Lele46g0374	865	Pfam	G-patch domain	196	237	IPR000467	GO:0003676
	Lele46g0374	865	MobiDBLite	consensus disorder prediction	47	114	-	-
	Lele46g0374	865	MobiDBLite	consensus disorder prediction	76	92	-	-
	Lele46g0374	865	ProSiteProfiles	G-patch domain profile.	196	241	IPR000467	GO:0003676
	Lele46g0374	865	MobiDBLite	consensus disorder prediction	54	73	-	-
	Lele46g0374	865	Coils	Coil	159	181	-	-
	Lele46g0374	865	SMART	G-patch_5	194	239	IPR000467	GO:0003676

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele46g0374	Lele-ChrLele46	2500482	2503079	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele46g0374	196	237	C2H2 Transcription Factor Family	AT5G26610	45.238	6.85e-07	50.1