Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0358 ATGCCACTCTCACCAACCCCTCAAATCATCACCTGCAAAGCTGCGGTGGCATATGGAGCTGGAGAGCCATTGGTAGTTGAGGAAGTTGAAGTGAGCCCTCCTCAACCTTTGGAGATTCGGATTAAAGTTGTCTCCACCTCTCTCTGTCGCAGCGATCTCTCCGCTTGGGAATCCCAAGCCATATTTCCTCGAATATTTGGCCATGAAGCGTCAGGGATTGTTGAGAGTGTGGGCGAGGGGGTGACTGAATTCAAGGAGGGAGACCATGTGCTAACTGTGTTCATTGGAGAATGCATGACATGCAGGCTGTGCAAATCTGGAAAAACAAACATATGTCAAGTTTTGGGATTGGAAAGAAGAGGCTTAATGCATAGTGATCAGAAGACACGTTTCTCAGTAAAAGGGAAGCCTATTTATCACTATTGTGCTGTTTCAAGTTTCAGTGAATATACAGTAGTGCATTCTGGGTGTGCAGTTAAAGTCAGCCCAAATGCTCCTCTTGAGAAAATATGCCTTTTGAGCTGTGGTGTTGCTGCTGGTCTGGGCGCTGCATGGAATGTTGCTAATGTATCAGAAGGATCAACAGTGGTGATATTTGGACTTGGAACTGTTGGCCTTTCTGTTGCACAAGGTGCTAAACTTAGGGGGGCATCTCGAATAATCGGCGTGGACAACAACCCTCAGAAGTGTGAAAATGCTAAAGCTTTTGGAGTTACAGAAGTTGTTAACCCAAATTCCTTTGACGAACCTATCGCTCAGGTTATTAAGCGCATTTCCAATGGTGGAGCTGATTTCTCTTTTGAATGCATCGGTGATACCAATATGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTTACCCTTGGTGTGCCAAAAGTGAAGCCTGAGATGTCAGCTCATTATGGACTATTATTAATGGGAAGAACATTGAAAGGATCTTTGTATGGAGGATGGAAACCCAAATCTGATTTGCCTTCATTAGTAGACAAGTATGTGAATAAGGAAATCCAGATTGATGATTACATAACACACGATTTGCCATTTGAGGAAATTAACAAAGCTTTCAATCTCATGATAGAAGGAAGGTGTCTGCGTTGTGTTATCCACATGCGCAGATAA 1134 0.4383 MPLSPTPQIITCKAAVAYGAGEPLVVEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQAIFPRIFGHEASGIVESVGEGVTEFKEGDHVLTVFIGECMTCRLCKSGKTNICQVLGLERRGLMHSDQKTRFSVKGKPIYHYCAVSSFSEYTVVHSGCAVKVSPNAPLEKICLLSCGVAAGLGAAWNVANVSEGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPQKCENAKAFGVTEVVNPNSFDEPIAQVIKRISNGGADFSFECIGDTNMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLLLMGRTLKGSLYGGWKPKSDLPSLVDKYVNKEIQIDDYITHDLPFEEINKAFNLMIEGRCLRCVIHMRR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0358 377 Pfam Zinc-binding dehydrogenase 204 329 IPR013149 -
Lele46g0358 377 PANTHER ALCOHOL DEHYDROGENASE 8 373 - -
Lele46g0358 377 SUPERFAMILY GroES-like 7 185 IPR011032 -
Lele46g0358 377 SUPERFAMILY GroES-like 326 374 IPR011032 -
Lele46g0358 377 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Lele46g0358 377 FunFam Alcohol dehydrogenase 6 15 193 - -
Lele46g0358 377 Gene3D - 180 318 - -
Lele46g0358 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 339 IPR036291 -
Lele46g0358 377 Gene3D - 15 370 - -
Lele46g0358 377 Pfam Alcohol dehydrogenase GroES-like domain 38 160 IPR013154 -
Lele46g0358 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0358 Lele-ChrLele46 2425498 2428048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0358 38 175 Monolignol Biosynthesis Gene Families AT4G37990 26.056 8.41e-10 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0358 46 2425498 2428048 Lele46g0358 46 2425498 2428048 ECH
Lele46g0358 46 2425498 2428048 Lele48g1124 48 15892957 15897880 hybridization