Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0348 ATGGAGTGGCGATTAGGTCTCAACCCTCTAGAAATGGAGCATGGGCATCATAGGAACTACAACTTTCCACCATTCCTAGCTACTACTTGCATTCGCATTCATCATCATCTTCATCATCCACCTTCACTCCCTTGGATAAGAGTATCGTCTCCCTCCTCTTCCCTCCAATCAAACAACCCTAACTGGTTGCTTCTGCATGAAACATCTCTCTCTCTTTTCTTCATATATCCAGTCAAAATCCCTCTCCTCACACGTAAAGCTCTGAACTTGGAGATGGAGATAGAGGCGAGCAGGGCGGTCGGGAATCATGGGACGACGGCGATTCCGGCGCTGAGTCCTCTCAGCGAGACGCTGTGGAGGGATACTAAGGCCAACGTCGACTTCGTCGGAGATGTGTCGGCTAGGCTTACCTGGAAGGATCTCACCGTCATGGTCACTCTCGGCAACGGAGAGACCCAGAACGTTCTCGAAGGTCTCACCGGCTACGCCGAGCCCGGCACCTTCACCGCCCTCATGGGCCCCTCCGGCTCCGGCAAGTCCACTCTCCTCGACGCCCTCTCTAGCCGTCTCGCTGCTAATGCCTTCCTCTCGGGATCCATCCTCCTCAATGGTCGCAAAGCCAAGCTCTCTTTCGGAACCGCTGCCTATGTGACGCAAGACGACAACCTCATAGGAACTTTGACGGTTCGAGAAACGATATCTTATTCGGCTCGTCTGAGGCTGCCGGATAAGATGCCGTGGTCGGACAAGCGAGCTCTGGTGGAGAGCACAATAATAGCCATGGGGCTTCAGGATTGTGCCGACACGGTGATCGGAAACTGGCATCTCCGGGGAATCAGTGGCGGAGAGAAGAGAAGAGTTAGCATCGCTTTGGAGATCTTGATGAGGCCCAGGTTGCTGTTTCTTGATGAACCTACCAGTGGACTCGACAGTGCTTCGGCTTTCTTTGTGACTCAAACACTAAGAGCCCTTGCAAGGGATGGTAGAACAGTGATAGCTTCAATTCACCAACCAAGCAGTGAAGTGTTTGAACTATTTGACCAATTGTACCTTCTTTCTGGCGGCAAAACTGTTTATTTTGGCCAAGCTTCTGAAGCTTACGAGTTCTTTGCACAAGCTGGCTTTCCATGCCCTGCTTTGAGGAACCCTTCTGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAGGCCACTCTCAAAGGCTCCATGAAACTCAGGTTTGAAGGAAGTGATGATCCTCTGGACAAGATAACTACAGCTGAAGCTATCCGGACTCTGATAGATTATTATCGGACTTCTCAGTACTCTTATGCTGCAACACAAAAAGTAGATGAGATTTCTAAAGTGAAAGGAACGGTGCTGGATTCAGGAGGAAGTCAGGCGAGTTTCTTCATGCAGGCATTTACATTAACAAAGAGATCATTCATCAACATGTCAAGGGATTTTGGATACTACTGGCTTCGTCTTGTCATCTACATTGTTGTCACTGTTTGCATCGGAACCATCTATCTCAACGTTGGAACTGGCTACAACTCCATTCTGGCAAGAGGTTCATGTGCATCGTTTGTGTTTGGGTTTGTGACATTCATGTCAATTGGAGGGTTCCCTTCGTTTGTGGAAGACATGAAGGTATTCCAAAGGGAGAGGTTGAATGGACACTATGGGGTGGTATCTTTTGTGATAAGCAACACATTATCTGCAATGCCGTTTCTGATACTCATAACGTTTCTGTCTGGAACCATCTGTTACTTCATGGTTCGTCTCCACCCTGGCTTCTGGCACTATCTCTTCTTCGTCTTGTGCCTCTATGCCAGTGTCACTGTCGTTGAGAGCTTGATGATGGCCATTGCTAGTATTGTCCCCAACTTCCTCATGGGTATCATCATTGGTGCTGGCATTCAGGGCATATTCATGTTGGTGTCTGGCTACTTCAGGCTCCCACATGACATACCAAAGCCATTCTGGCGCTACCCAATGTCTTATATCAGTTTCCACTTCTGGGCGTTACAGGGTCAATACCAGAATGATCTGAAAGGGTTGATCTTCGACAACCAGACGCCGGATCTTCCGAAGATTCCGGGGGAGTACATTCTGGAGAACGTGTTCCAGATTGATGTAAACAGATCGAAGTGGATTGATTTGATAGTGATATTCAGCATGATCATCATATACCGAATCATCTTCTTCATAATGATCAAGATCAATGAGGATGTGACTCCATGGGTGAGGGGTTACATTGCCAGGAGAAGAATGCAGCAGAAGAGTGCAACACAGAACACCACCATTGCTCCGGATATTCTCACTCAATCTCCTTCTCTAAGAACCTATATCACAAGCCAATCCAGTTCTGCTGCTCGGACAAGGTAA 2376 0.4806 MEWRLGLNPLEMEHGHHRNYNFPPFLATTCIRIHHHLHHPPSLPWIRVSSPSSSLQSNNPNWLLLHETSLSLFFIYPVKIPLLTRKALNLEMEIEASRAVGNHGTTAIPALSPLSETLWRDTKANVDFVGDVSARLTWKDLTVMVTLGNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKRALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYYRTSQYSYAATQKVDEISKVKGTVLDSGGSQASFFMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTVCIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVVSFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFDNQTPDLPKIPGEYILENVFQIDVNRSKWIDLIVIFSMIIIYRIIFFIMIKINEDVTPWVRGYIARRRMQQKSATQNTTIAPDILTQSPSLRTYITSQSSSAARTR 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0348 791 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 136 379 IPR003439 GO:0005524
Lele46g0348 791 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 373 IPR027417 -
Lele46g0348 791 Pfam ABC transporter 158 307 IPR003439 GO:0005524
Lele46g0348 791 Pfam ABC-2 type transporter 469 675 IPR013525 GO:0016020|GO:0140359
Lele46g0348 791 Gene3D - 130 374 IPR027417 -
Lele46g0348 791 SMART AAA_5 165 336 IPR003593 -
Lele46g0348 791 FunFam ABC transporter G family member 11 130 373 - -
Lele46g0348 791 ProSitePatterns ABC transporters family signature. 279 293 IPR017871 GO:0005524|GO:0016887
Lele46g0348 791 CDD ABCG_EPDR 133 361 - -
Lele46g0348 791 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 124 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0348 Lele-ChrLele46 2372533 2379887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0348 166 367 Calmodulin-binding Proteins AT2G36910 31.455 1.74e-11 66.2