Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0325 ATGGAAGGAACTGAGAAATTGTCTGATTACAAAGTTGGCACTCTCCCAACTGTTCTATACGTACCCAACTTCATCACACATCATGAAGAGAATTTTCTTCTCAATAATATATATGGAGCTCCTCCGTCAAAGTGGAAGTCATTGAAAAATAGAAGGCTACAGAATTGGGGTGGTGTGGTGCATGAGAAGGGGCTTCTACCTCAAGCTTTGCCTCCATGGTTAACAAACCTCACCGAAAAAATATATGAACAATCAGGACTATTCTCATCAGCCATCAATCATGTTCTCATCAATGAATATCTACCTAACCAAGGCATAATGCCACACCAGGATGGGCCTGCCTATTTTCCTGTTGTAGCAATTCTTTCCCTTGGATCTCCTGCTGTCATGGACTTCACTCCCCATTCCAGATTGAAACTGGATCCACATGATGTTCTTGATACTAATAATGATGATGGAACTATAAAGACTGAGAAAAGTCAATGGCTTGATGATCACCACCCATTTTCTGTCTTGTTGATGCCTCGCAGTCTTCTGATATTCAAGGATCAAGCATATTCAGATTACTTGCATGGTATAAAAGATACTGAGGTGCATTGCCTTGATGGGGCCGTAAATGAAGCTCTGGCTTTGAAACACAATGAATTAGATCACCCGCTTTCATGCTCAGAGGAAGCTGGGTATAAGAATGTACATAGGACATCCAATAGAATTTCACTGACTTGTAGGCTGGTACCAAAAGTTCACAAAAATTTAGTAAACCCCCCCCCCCCCCCCATTTCTACTCCAGTCAAATTAATACTTGTACTTTCTGCTCCAGCCAAGGTTCTCCCCGATCCCGCGCTCAGATGCACAATTCGTCAGCCTCTGCTCTCTCTTTCACTCTCTCCTTTCTTCGGTTGTGTTTCACAGTTTCTTCCTAAAGTATCAAATTCAGCGCCTGATTTCGGATTTGTCCCGTCAGATATCTTCCTCATATTTCCGTGGTTCAACGGTACTGCTATTCTGAAGCTTCGTTTTCATATCGGATCTATTGTAGGCAAATTATGCTTTGAGGGGATGAAGAAAGTCCCATATGTGGATACTGAGAAGTCTGAGCAAACTAGCTTCAAGGTTGTATTTGACAAGTTGGTGAAGGAACTTCGGGAACCTGTAGAATTTGAACTTCCAGATTGGTTTAATAAGTGGAAGTCAACGCGCTACACCTCTATAAAACGAAATATATATCACACGAAGAAGGTCAGGAAAAAACTTGATGATGATGGGATTTTCTGTTCCTGTACTTCCTCAGCTGGATCTTCTAGTGTATGTGGTAAAGACTGCTTCTGTGGGATGCTGTTTTCTACTTGCTCTTCAGGCTGCAAATGTGGGAGCTCTTGTCTGAACAAACCATTCCAGAGTCGATCTGTGAAGAAGATGAAACTGGTCGAGACAGAGAAATGTGGTTCAGGAATTGTGGCAGATGAGGATATTGAACAAGGGGAGTTTGTGATAGAATATGTAGGAGAAGTCATTGATGACAAAGAATGTGAACGTAGGCTTTGGAATATGAAACATCGAGGGGAGACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACGTTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGTTGCCCCAACACTGAGATGCAGAAATGGGTAATCGATGGTGACACAAGAATTGGCATATTTGCAACTCGTAACATTAAAAAGGGGGAACATCTGACATATGATTACCAGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGGGTTCGACCACCCAAGCCCAAAATGGCTTCTGATGCTGCATTAAAATTAGTTGCACATCAGGTTTATCAAAATGGAGGTTTGAATACAGGAAGTTCTGATGTTGTTGGCCAACAAAAGTGCTCGCACAATTGCATTGGTCAAGTTGTTAGGATAAATGAGAGGTTTGGGATTATTAGGCGGTTTGATAAATATTCCAAAAAGCATTCGATCATGTTTGAGGATGGTACTGTTCGTTTTCTTGACATGTCAGAAGAAGACTGGGAGTTTGTGAGACTTGAGGTGGAGAGGTGA 2121 0.4173 MEGTEKLSDYKVGTLPTVLYVPNFITHHEENFLLNNIYGAPPSKWKSLKNRRLQNWGGVVHEKGLLPQALPPWLTNLTEKIYEQSGLFSSAINHVLINEYLPNQGIMPHQDGPAYFPVVAILSLGSPAVMDFTPHSRLKLDPHDVLDTNNDDGTIKTEKSQWLDDHHPFSVLLMPRSLLIFKDQAYSDYLHGIKDTEVHCLDGAVNEALALKHNELDHPLSCSEEAGYKNVHRTSNRISLTCRLVPKVHKNLVNPPPPPISTPVKLILVLSAPAKVLPDPALRCTIRQPLLSLSLSPFFGCVSQFLPKVSNSAPDFGFVPSDIFLIFPWFNGTAILKLRFHIGSIVGKLCFEGMKKVPYVDTEKSEQTSFKVVFDKLVKELREPVEFELPDWFNKWKSTRYTSIKRNIYHTKKVRKKLDDDGIFCSCTSSAGSSSVCGKDCFCGMLFSTCSSGCKCGSSCLNKPFQSRSVKKMKLVETEKCGSGIVADEDIEQGEFVIEYVGEVIDDKECERRLWNMKHRGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWVIDGDTRIGIFATRNIKKGEHLTYDYQFVQFGADQDCHCGAVTCRRKLGVRPPKPKMASDAALKLVAHQVYQNGGLNTGSSDVVGQQKCSHNCIGQVVRINERFGIIRRFDKYSKKHSIMFEDGTVRFLDMSEEDWEFVRLEVER 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0325 706 ProSiteProfiles SET domain profile. 471 588 IPR001214 GO:0005515
Lele46g0325 706 SMART shorttest3 420 470 IPR006560 GO:0005634|GO:0018024
Lele46g0325 706 CDD SET_ASHR3-like 472 610 - -
Lele46g0325 706 SMART set_7 471 594 IPR001214 GO:0005515
Lele46g0325 706 SUPERFAMILY Clavaminate synthase-like 16 246 - -
Lele46g0325 706 Pfam 2OG-Fe(II) oxygenase superfamily 52 243 IPR027450 -
Lele46g0325 706 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 394 649 IPR025787 -
Lele46g0325 706 Gene3D SET domain 382 626 IPR046341 -
Lele46g0325 706 ProSiteProfiles AWS domain profile. 420 469 IPR006560 GO:0005634|GO:0018024
Lele46g0325 706 FunFam Histone-lysine N-methyltransferase 387 626 - -
Lele46g0325 706 SMART PostSET_3 594 610 IPR003616 -
Lele46g0325 706 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 91 246 IPR005123 -
Lele46g0325 706 PANTHER SET DOMAIN PROTEINS 361 628 - -
Lele46g0325 706 SUPERFAMILY SET domain 377 600 IPR046341 -
Lele46g0325 706 Pfam SET domain 482 587 IPR001214 GO:0005515
Lele46g0325 706 ProSiteProfiles Post-SET domain profile. 594 610 IPR003616 -
Lele46g0325 706 Gene3D - 8 252 IPR037151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0325 Lele-ChrLele46 2182626 2192762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0325 450 606 C2H2 Transcription Factor Family AT2G23740 34.463 8.04e-22 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele46g0325 2OG-FeII_Oxy_2 1.9e-12 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0325 46 2182626 2192762 Lele05g1994 05 14185562 14194101 CCT
Lele46g0325 46 2182626 2192762 Lele06g1831 06 12854514 12862562 CCT
Lele46g0325 46 2182626 2192762 Lele07g2040 07 13654657 13662914 CCT
Lele46g0325 46 2182626 2192762 Lele08g1832 08 12711766 12719818 CCT
Lele46g0325 46 2182626 2192762 Lele47g1090 47 16578823 16582797 hybridization