Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0298 ATGGGATTCTGGGGCATTGAAGTGAAACCTGGAAAACCATATCCTTATCACGCGGACAATGTGCAAGGGAAGCTTCACTTAACTCAGGCAACGTTGGGCCTTGGCTCGTCAACTGAGAAAAGCATTCTCCAATGTTCTGCTGGACATAAAAATCCAGTCTTTTTGTGCTCATTGCTGCCAAATAGTAATGAGTCATGCCCTTTGAATCTTGAGTTTGATGAAGATGATTTAGTGGCCTTCTCAGTAATTGGTCCACGCAGTATCCATCTCTCTGGGTTTTTTGAGGCTGCTGATGGGAATGAACTTAGGGATGACTATGAGTATGATTATTTTGGAGAGGATATTGCTGATACAGACACAGATGAGTCTTCTGAATACAACACTGAAGATGAATATGCAGATGGCTTCATTGATGATAGTGATATTGACAGTTATCCACCTTCACCTGTCCCAAATAGTGGAGTTGTAATTGAGGAAATAGTAGATGATGATAAGCCTGAAAGTGGAGATAATGCTTCCAAGAAGTCGAAGAAAAAGGTTCAAATGCCCAACTCTAAGGACGGCAAAAATTCTCAGCAGCAAATTGTTGTCAGAGGTGATAAGAGTGTCCCTGTTTTGGAAAGTGAAGATGAAGATGGTTTTCCAATTTCTGCTTCTCCGAAGGCAGAAGCAAAAGAAGAAAAGACGCATAAGAGAACTGAGAAAGCCAATAAAAAGAAAGTGAAAGATGATGATCATGCTGCAACATTGAAACGAAAAGTTGAAAGTGCTGACAAAGATGAGCATCAAGAAGGGAAAAAGACAAAGAAAAAGAAGTTGAAAGAACAAGTTAAAGGGGATGGTGCCAAAGTATCTAATGATAGCAATGAGACTCATGATGCTAATGCAGATGGTAAATATCCTGAGGAGGTGAAAATAACAACCAGCCTTGATCACGTTTCTCATGCTGAGGATGAGTATGAAGGAAATGTATCAAAAGAAAAAATCCTTGATGAGAAGAAAAAGAAGAAAAAGAAGAAGAAGAAGACTAAGGATGAAGGGGTAACTAATGCGAATCAAACTTCCACAGATACGGGAAATCAGAATATAACCACTTCTGAGAGAGTAGAGGAGGAAAAAGAAGCCAAGCCATCTCAAATAAGAACCTTCCCAAATGGGTTAGTTGTTGAGGAACTATCCATGGGTAAACCAGATGGCAAAAGAGCTACCGCTGGAAAACAGGTCAGTGTTAGATACATTGGCAAACTACAGAAAAATGGGAAAATATTTGACTCGAATATCGGAAGAGCGCCCTTTAAATTTCGCCTTGGTATTGGGCAAGTCATAAAGGGTTGGGACGTTGGGGTCAATGGTATGAGAATTGGGGACAAAAGAAGAATAACAATTCCACCATCAATGGGTTATGGAGATAAACGTGCTGGGAGCATACCTCCAAATTCTTGGCTTGTATTTGATGTTGAGTTGATCGATGTTCGCTGA 1479 0.403 MGFWGIEVKPGKPYPYHADNVQGKLHLTQATLGLGSSTEKSILQCSAGHKNPVFLCSLLPNSNESCPLNLEFDEDDLVAFSVIGPRSIHLSGFFEAADGNELRDDYEYDYFGEDIADTDTDESSEYNTEDEYADGFIDDSDIDSYPPSPVPNSGVVIEEIVDDDKPESGDNASKKSKKKVQMPNSKDGKNSQQQIVVRGDKSVPVLESEDEDGFPISASPKAEAKEEKTHKRTEKANKKKVKDDDHAATLKRKVESADKDEHQEGKKTKKKKLKEQVKGDGAKVSNDSNETHDANADGKYPEEVKITTSLDHVSHAEDEYEGNVSKEKILDEKKKKKKKKKKTKDEGVTNANQTSTDTGNQNITTSERVEEEKEAKPSQIRTFPNGLVVEELSMGKPDGKRATAGKQVSVRYIGKLQKNGKIFDSNIGRAPFKFRLGIGQVIKGWDVGVNGMRIGDKRRITIPPSMGYGDKRAGSIPPNSWLVFDVELIDVR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0298 492 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 286 - -
Lele46g0298 492 MobiDBLite consensus disorder prediction 161 379 - -
Lele46g0298 492 MobiDBLite consensus disorder prediction 221 331 - -
Lele46g0298 492 MobiDBLite consensus disorder prediction 348 365 - -
Lele46g0298 492 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 405 492 IPR001179 GO:0003755
Lele46g0298 492 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 400 489 IPR001179 GO:0003755
Lele46g0298 492 Coils Coil 326 346 - -
Lele46g0298 492 MobiDBLite consensus disorder prediction 135 154 - -
Lele46g0298 492 SUPERFAMILY FKBP-like 316 491 - -
Lele46g0298 492 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Lele46g0298 492 Gene3D - 349 492 IPR046357 GO:0003755
Lele46g0298 492 Gene3D Nucleoplasmin core domain 1 100 - -
Lele46g0298 492 PIRSF FK506-bp_FPR3 243 492 IPR023566 GO:0003755
Lele46g0298 492 PIRSF FK506-bp_FPR3 49 311 IPR023566 GO:0003755
Lele46g0298 492 PIRSF FK506-bp_FPR3 1 54 IPR023566 GO:0003755
Lele46g0298 492 MobiDBLite consensus disorder prediction 161 184 - -
Lele46g0298 492 FunFam Peptidyl-prolyl cis-trans isomerase 381 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0298 Lele-ChrLele46 1973699 1978584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0298 405 492 Calmodulin-binding Proteins AT5G48570 50.000 1.18e-17 84.0