Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0276 ATGGGGAAAACACGACGACTTTCTCCATCAGCCAAATTGTCAAGAAAAAACTCAGAAGAAGAAGAGGAAGAGGAGGAGGAGAGAAACAGGGGAGACATGGAGCTTGGTGTAAATCCATTCCCATTAACGTTTACAGTTCACTTTCTGGGCGAAGGTACAAAGTTCTTTATGAATTATGGCTTCTTTATGAACAAGAATTACAGATTTGTTTTGCAAAAATGCAGCAATCATAAGTTACAAAGCTCTTGCGTTGGAGAAAGAAGTGAAGAAAGTGATACACCTGGTGCTTCATGCCATTGCATTGGTGCTTGGAATAGTGGGGACTTACGCTGTGTCTTGTTTCATAATGAGAAAGACATTGCTAATCTCTACAGCTTTCATTCCAGGCTTGGAATTGCAGCTATTGTTCTCTACGGCGTTCAGGGGATATGTGGGTTTGTGATATTCATGTACCCAGGAGGGAACCCAAATCTGAGAAGAGTTTCAATGCCATGGCACATCATGTTTGGGCTGATGGTGTACGTCATTGCTGTTGCTGCCGCAGTTCTTGGATTTCTGTAG 561 0.426 MGKTRRLSPSAKLSRKNSEEEEEEEEERNRGDMELGVNPFPLTFTVHFLGEGTKFFMNYGFFMNKNYRFVLQKCSNHKLQSSCVGERSEESDTPGASCHCIGAWNSGDLRCVLFHNEKDIANLYSFHSRLGIAAIVLYGVQGICGFVIFMYPGGNPNLRRVSMPWHIMFGLMVYVIAVAAAVLGFL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0276 186 Coils Coil 10 30 - -
Lele46g0276 186 Pfam Eukaryotic cytochrome b561 111 185 IPR006593 -
Lele46g0276 186 Gene3D - 107 186 - -
Lele46g0276 186 MobiDBLite consensus disorder prediction 1 34 - -
Lele46g0276 186 PANTHER CYTOCHROME B561-RELATED 113 186 IPR043205 GO:0016491
Lele46g0276 186 SMART 561_7 46 185 IPR006593 -
Lele46g0276 186 ProSiteProfiles Cytochrome b561 domain profile. 112 186 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0276 Lele-ChrLele46 1814752 1815918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0276 115 186 Chloroplast and Mitochondria Gene Families AT4G25570 54.167 1.55e-21 87.0