Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0274 ATGGGGAGGTCACCATGTTGTGATAAAGATGGAGTGAAAAAGGGAGCCTGGACTCCGGAAGAAGATGAAATCTTAGTTCAGTACATCAAGAAGCATGGCTGTGGTAATTGGCGTACACTACCCAAGAATGCAGGTCTACTTCGATGCGGAAAAAGTTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGACATCAAGCGTGGCCCTTTTACTAGTGAAGAAGAAGGTAAAATTATTCAACTTCATGGCATGCTCGGCAAAAGGTGGGCTGCTATAGCATCTCATTTACCAGGAAGAACAGACAATGAAATTAAGAACTATTGGAACACCCATCTGAAGAAGCGCTTCATTCACTCAGGTCATTCGCTGGAGGCGCAAGAGCCCTCTTTTGGTCCTCATCATCAAAGTGATATGAAATATGAATATTCTTCTGTAAGTCATGTAATCCAGTGGGAAAATGCCAGAGTTGAGGCAGAAAAAAGGTTGTCAATGGAACTGGAATCCTCATGTCTTAATCATTGTTCCCAAACTAACACACATTCTGACTGCTTTCTTCGACTTTGGCACTCCGAGGTAGGACAATCATTTCGCATGATCACGGAAAAGAAAGCGGAAAGCGAAAGCCCTACCTCGCAAGCAAGCAGTGGCTTTGCCAACATGGCTCAAGAACAAGCAAGCAGCTGCAATCCAAAGCTTGAAGAAGGCACAGCTGGGTCAGACTCAGGTTCTCATGAATTTCTTGATGCCTCTGATTCTGCATTGAAGCTCCTGCTAGATATGCCTGATAACAATGTGGGATTCTTTGAAGGATTGGAACAGACTGAGAATTTCCAGAGTCCTCAGCATGATAGATATGACTAA 861 0.4425 MGRSPCCDKDGVKKGAWTPEEDEILVQYIKKHGCGNWRTLPKNAGLLRCGKSCRLRWINYLRPDIKRGPFTSEEEGKIIQLHGMLGKRWAAIASHLPGRTDNEIKNYWNTHLKKRFIHSGHSLEAQEPSFGPHHQSDMKYEYSSVSHVIQWENARVEAEKRLSMELESSCLNHCSQTNTHSDCFLRLWHSEVGQSFRMITEKKAESESPTSQASSGFANMAQEQASSCNPKLEEGTAGSDSGSHEFLDASDSALKLLLDMPDNNVGFFEGLEQTENFQSPQHDRYD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0274 286 MobiDBLite consensus disorder prediction 205 236 - -
Lele46g0274 286 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele46g0274 286 FunFam Myb transcription factor 11 67 - -
Lele46g0274 286 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele46g0274 286 MobiDBLite consensus disorder prediction 201 245 - -
Lele46g0274 286 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele46g0274 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele46g0274 286 SMART sant 66 114 IPR001005 -
Lele46g0274 286 SMART sant 13 63 IPR001005 -
Lele46g0274 286 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele46g0274 286 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele46g0274 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele46g0274 286 Gene3D - 69 115 - -
Lele46g0274 286 CDD SANT 16 61 IPR001005 -
Lele46g0274 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 218 - -
Lele46g0274 286 Gene3D - 13 66 - -
Lele46g0274 286 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0274 Lele-ChrLele46 1805828 1808022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0274 1 269 MYB Transcription Factor Family AT3G61250 53.025 2.75e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele46g0274 Myb_DNA-binding 5.3e-16 CL0123