Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0272 ATGGGGCGGCAGCCAGGTGATAAGGCAAAACCTAAACACAGAAAAGGGTTATGGTCACCTGAAGAAGACAATAAACTCAGAAACTATATCCTCAAGCATGGCCTTGGCTGCTGGAGCTCTGTTCCCATCAACGCAGGGTTGCAGAGGAATGGGAAGAGTTGCAGATTGAGGTGGATCAACTATCTAAGGCCAGGATTGAAGAGAGGGATGTTCAGCAAACAAGAGGAGGAGACAATCTTGACCCTTCATCACATGCTAGGCAACAAGTGGTCTCAGATAGCACAGCATTTACCAGGAAGGACAGATAATGAGATAAAGAACCACTGGCATTCATATCTGAAAAAGAAAGTGGCCAAGGCAGAGGAAATACAATCTCATAATAACAATAATAATAAACAAATTCAGTATGCTAGCTCAAGCTCAGATACCTTCGATTCCTCTTCATCATCAACAAGTCAAAATCCTGCAATAATCCCAATCTCTGATCACTTCTCTTCTTCTTTGCAAAACCATAACTTCATCAAAGAGTCTACTCACAGCTCCTTACCACAACTTCTATTTGCCGAGTGGCTTTCGCTAGATCAAGTGAACAGCGCGATCCCTGCGAATTCGGGTGATGACCCTTTTGTGTTTGGAAATGGAAGTTTTGATCAGTACTCAGATTTCCATGAAGCTGCAATTCATAATGGTGTTTCAGAAGGAGGAAGCTATGGTGGGGAGTTTCATAATGTTCTGACAACCCCAAATGTTACTGAAGTCTTCAATTCACAGTTCAAGATAGCAAATCAAATGGCAGAAAATAATGGGGTCATCAATTTCCCAAGTTTCAGCATGAACAATGATGAAATGTACATATAG 858 0.4184 MGRQPGDKAKPKHRKGLWSPEEDNKLRNYILKHGLGCWSSVPINAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILTLHHMLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKKVAKAEEIQSHNNNNNKQIQYASSSSDTFDSSSSSTSQNPAIIPISDHFSSSLQNHNFIKESTHSSLPQLLFAEWLSLDQVNSAIPANSGDDPFVFGNGSFDQYSDFHEAAIHNGVSEGGSYGGEFHNVLTTPNVTEVFNSQFKIANQMAENNGVINFPSFSMNNDEMYI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0272 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele46g0272 285 PANTHER MYB DOMAIN PROTEIN 55 1 220 - -
Lele46g0272 285 CDD SANT 71 113 IPR001005 -
Lele46g0272 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Lele46g0272 285 MobiDBLite consensus disorder prediction 125 156 - -
Lele46g0272 285 CDD SANT 18 62 IPR001005 -
Lele46g0272 285 FunFam MYB transcription factor 12 68 - -
Lele46g0272 285 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Lele46g0272 285 Gene3D - 69 142 - -
Lele46g0272 285 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele46g0272 285 SMART sant 14 64 IPR001005 -
Lele46g0272 285 SMART sant 67 115 IPR001005 -
Lele46g0272 285 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele46g0272 285 Gene3D - 15 67 - -
Lele46g0272 285 FunFam MYB transcription factor 70 146 - -
Lele46g0272 285 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele46g0272 285 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0272 Lele-ChrLele46 1798766 1801011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0272 8 243 MYB Transcription Factor Family AT3G48920 42.857 2.58e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele46g0272 Myb_DNA-binding 3.5e-12 CL0123