Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0269 ATGGGTGTGAAGCATCTGTGGGATATACTCGAATCCTGCAAGAAAACAGTTCCACTTCATCATCTCCAGAACAAGAGGATATGCATAGATCTCTCATGTTGGATAGTTCAACTTCAGAATGTGGGAAAATCAATCTCATGTGTGAAGGAGAAACTCTACCTCAGCGGCCTCTTTCACCGCATTAGAGCGCTCACTTCTTTGAATTGCAGCTTAATTTTTGTTGCAGATGGATCAATTCCTGCTATTAAGTTATCAACTTATAGGCAACGATTAAACTTTGGAAGAGATGTAGGACAAGATGGAAGCAACTTACAGAAAATGTCTTCTTTACCAAGGAACAAGGGATCTGAGTTTTCATGCATGATAAAAGAGGCTCACGTCTTGGGAATGGCTCTTGGCATCCCTTGTCTGAACGGGATTGAAGAAGGTGAAGCTCAATGTGCTTTGTTGAACTCCGAATTATTGTGTGATGGATGTTTCAGTTCAGATTCAGATATCTTTCTTTTTGGTGCAAGGACAGTGTATAGGGATATTTGCCTTGGAGATGGTGGATATGTTGTTTGCTATGAGATGGAAGACATTGAAAGAAAACTTGGATTTGGAAGGGACTCATTGGTTTGTGCATGTCAAGGCTGTGAAAGAGTAGTTAGGGCTAGGAAGATTGCTCTTGCCCTACTTCTTGGGAGTGATTATAGTCAAGGAGTTTATGGTATAGGTCCAGAGTCAGCTTGTCAGATAGTTAGATCAATTGGTGACAAATGTGTGCTCCAAAAATTTGCTTCTGAAGGAATTGAATGTCTGAAAACACTGAAAGGAGGCGAGAACAATTCACAAAGAGATTATAACTTCTTGCAAGTCATCAATGCTTATGTGAAGCCGAAATGCCACCTGGCAGACTCCGATATTGTGATGAGGGTTGTTGCTCAGTATCCATTTCAACGCAGTAAACTCCAGCAGATATGTGCTGAATTCTTTCAATGGCCTCCGGAAAAAACAGATGAGTATATCCTTCCAAAGATAGCTGAAAGGGATTTACGGCGATTTGCCAATTTGCGCTTAACTTCATCAGAAGTAGGAGTGAATCTTCCTTTGAATGAGATCCCTGTAAAGTGTCCTGTCTCGGAAATCATTAAGTGCCGAAAAGTTCAAGGAAGAAAATGCTATGAGGTCTCAGGGACTGAAATGGATGGACTTAGAACTTCAATAGTTTCGGCAGATCTTTTAAAAAGTGCTTGTCCTGAGAAGATTTTAGAATTTGAGGAGGAAAAAGGTCGGCTTAAGAAACAAAATGCTCATAAAGGAATACCAAAGAAAACTGAAACTGCATCATCTTCTATGGCTGAACTTGACCTGAAACTCGCGAATCTGTCACTGGACATCAGTCTGGGAGACCATGCCAATAATCACAATGCCTCTGATTCATCAGAAGAGGTATTTGAAGATTCATCTGCCATGGATGATGAAGCTTATCTGAATAACAGAGATTTGTCGTGTTCATCACATAATGAACAGTTGAATGGAATCAAAATGTGA 1533 0.4044 MGVKHLWDILESCKKTVPLHHLQNKRICIDLSCWIVQLQNVGKSISCVKEKLYLSGLFHRIRALTSLNCSLIFVADGSIPAIKLSTYRQRLNFGRDVGQDGSNLQKMSSLPRNKGSEFSCMIKEAHVLGMALGIPCLNGIEEGEAQCALLNSELLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEMEDIERKLGFGRDSLVCACQGCERVVRARKIALALLLGSDYSQGVYGIGPESACQIVRSIGDKCVLQKFASEGIECLKTLKGGENNSQRDYNFLQVINAYVKPKCHLADSDIVMRVVAQYPFQRSKLQQICAEFFQWPPEKTDEYILPKIAERDLRRFANLRLTSSEVGVNLPLNEIPVKCPVSEIIKCRKVQGRKCYEVSGTEMDGLRTSIVSADLLKSACPEKILEFEEEKGRLKKQNAHKGIPKKTETASSSMAELDLKLANLSLDISLGDHANNHNASDSSEEVFEDSSAMDDEAYLNNRDLSCSSHNEQLNGIKM 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0269 510 CDD PIN_GEN1 2 198 - -
Lele46g0269 510 Gene3D - 2 199 - -
Lele46g0269 510 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 129 146 IPR006084 -
Lele46g0269 510 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 71 90 IPR006084 -
Lele46g0269 510 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Lele46g0269 510 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 220 235 IPR006084 -
Lele46g0269 510 SUPERFAMILY PIN domain-like 2 210 IPR029060 -
Lele46g0269 510 SMART xpgn3 1 97 IPR006085 GO:0004518
Lele46g0269 510 FunFam Flap endonuclease GEN-like 1 216 272 - -
Lele46g0269 510 Pfam XPG I-region 133 209 IPR006086 GO:0004518
Lele46g0269 510 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 468 IPR006084 -
Lele46g0269 510 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 221 351 IPR036279 -
Lele46g0269 510 Pfam XPG N-terminal domain 1 90 IPR006085 GO:0004518
Lele46g0269 510 SMART HhH_4 217 250 IPR008918 GO:0003677|GO:0003824
Lele46g0269 510 Gene3D - 217 286 - -
Lele46g0269 510 SMART xpgineu 130 200 IPR006086 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0269 Lele-ChrLele46 1769053 1774410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0269 1 251 Core DNA Replication Machinery Family AT5G26680 24.444 1.82e-09 57.8