Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0261 ATGGCTCCGCCGCCGGCGGATCACAACGGCGAGTCCACGGCCGGTGACACCCAGAGATCTATTCCAACGCCGTTTCTCACCAAAACGTATCAGCTCGTCGACGATCGCACCAAAGACGATGTGATCTCGTGGAACGAAGATGGATCTACTTTCATCGTTTGGAACCCTACCGAATTCGCCAGAGATTTGCTTCCTAAATATTTTAAGCACAACAACTTCTCTAGCTTTGTTCGCCAACTCAACACCTATGGATTCAGGAAGGTTGTACCTGATCGATGGGAATTCTCGAACGAGTGTTTCCGCAGAGGCGAGAAACGGCTTCTGTGCGAAATACAGCGACGGAAAATTTCAACGCCTTCGCCTTCGCCGCCGACAGCGACGTCGCCGGCATCCAAGGGCGGAGCCACTCCGACTGTGGCAGTACCGGCGCCGGTGCAGGTGACTTCTATACTGACGGCGATGCCGATGATATCGACATCAAACTCAGACGAGGAGCAAGCTATTTCATCGAATTCGTCGTCCTCAAAAGCTCCGGCTGAGCTCATGGACGAGAACGACAGGCTGCGAAAAGAGAACGTGCAGCTGTCGAAGGAATTAGCGGAGATGAGATCTCTGTGTAACAATATTTTCTCCCTGTTATCCAACTACGCCAACAACCAAATCGATGGTGCTGTGCAAGGAAAAGACACCGTGAAACCGCTGGATTTGATGCCGTCGAAACGGAACTCCGGTGAGGAGGAGCCGTCGGCGGTGGATGAGTTAAATCCGAAGCTGTTTGGGGTGGCGATTGGTGCGAAGAGAGCGAGAGGAGCGGAAGAGGAGGACACACTGTTAAGCTTGCATCAGCCGGGGCCAGCGGAGGTGAAATCTGAGCCGTTGGATTGTCAGAACCATCGAGAGTGGCCGGATCAATGCGATATAGCAAATCAGAGAGTGTGTAATTAG 945 0.527 MAPPPADHNGESTAGDTQRSIPTPFLTKTYQLVDDRTKDDVISWNEDGSTFIVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNECFRRGEKRLLCEIQRRKISTPSPSPPTATSPASKGGATPTVAVPAPVQVTSILTAMPMISTSNSDEEQAISSNSSSSKAPAELMDENDRLRKENVQLSKELAEMRSLCNNIFSLLSNYANNQIDGAVQGKDTVKPLDLMPSKRNSGEEEPSAVDELNPKLFGVAIGAKRARGAEEEDTLLSLHQPGPAEVKSEPLDCQNHREWPDQCDIANQRVCN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0261 314 MobiDBLite consensus disorder prediction 159 179 - -
Lele46g0261 314 FunFam Heat stress transcription factor B-4 17 115 - -
Lele46g0261 314 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele46g0261 314 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele46g0261 314 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele46g0261 314 Gene3D - 17 115 IPR036388 -
Lele46g0261 314 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele46g0261 314 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele46g0261 314 Coils Coil 185 205 - -
Lele46g0261 314 MobiDBLite consensus disorder prediction 115 134 - -
Lele46g0261 314 MobiDBLite consensus disorder prediction 113 138 - -
Lele46g0261 314 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 233 IPR027725 -
Lele46g0261 314 MobiDBLite consensus disorder prediction 159 183 - -
Lele46g0261 314 MobiDBLite consensus disorder prediction 1 21 - -
Lele46g0261 314 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele46g0261 314 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0261 Lele-ChrLele46 1715896 1716921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0261 1 314 HSF AT5G62020 46.687 3.38e-90 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele46g0261 HSF_DNA-bind 3.2e-33 CL0123