Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0255 ATGCAGAAAAGGAAAATGGATCATCAGGGACATAATGTTGAGATGAGTCTTCTGGGGGAAAACTTCGATCCGAGTTTGATTGCAAGAATTAGGGATGATGGATATGAGAGCCGTTCTGGGAGTGATAATTTCGATGGCGTCTCAGGCGAAGATGATCAAGATATTGCTGGTGATGATAACACACCTAATCAGAGATCCAACAAGAAGTACCATCGACACACTCCTCACCAAATTCAAGAGCTTGAAACTTTCTTTAAGGATTGTCCTCATCCTGACGAGAAGCAAAGACTTGAACTTAGTAGGAAGCTTGGCTTGGAGACGAAGCAAGTCAAATTCTGGTTTCAGAATCGAAGAACCCAGATGAAGACTCAACTGGAGCGGCATGAGAATCTGATTCTGAGGCAAGAAAATGACAAGCTGCGAGCAGAGAACAGTATGATGAAGGAAGCCATGACGAACCCAATATGCAACAACTGTGGAAGCCCTGCGATTCCTGGGCAAATCTCATTTGAAGAACACCAACTAAGGATTGAGAATGCTCGATTGAAGGACGAACTGGATCGCATTTGTGCCTTGTCCAACAAGTTTCTGGGAAGGCCAATCTCAACCATGGCTCTTCCAAGCTCAAATTCTAGTCCTGAACTGGCCATTGGAACGAATAATAGTAATACTTTCAGTGGGATCGGTGGGATCGGTGTCGGGTCGAGTTTTCCGATGGGTATTGATATGGGGATGACGATGCAAATGGGGAATGATCAAGCAGAGGCTGAGAGATCTATGCTTATAGACCTTGCATTGTCTGCTATGGAGGAATTGATGAAGATGGCTCAAGGAGATAATGGTCCTCTTTGGATTAGGACGTTGGATGGCGAAAATGAAGTTCTGAATCTTGAGGAGTATGTTCGGATTATTCCTCCTTGTCTTGGCCCAAAACCTCCTGGTTATGTCACTGAAGCTACTAGAGACACTGGAATAGTGATTATCAACACTTTAAATCTCATTGAAACATTGATGGACCCGAATCGATGGGTGGAGCTTTTTCCAGGCATGATTGCTAGAGCTGTTCCGCTGGATATGATATCAAGTGGCGTGGGGGGCACCAGAAGCGGGACTTTGCTCCTGCTGGAAGCTGAGATGCAGATGCTGTCGCCACTGGTGCCTGTTAGGCAAACGAGGTTGCTGAGATTATGCAAGCAGCAAGCAGAAAATCTTTGGGCGGTGGTTGATGTATCGGTGGAGATAGGTCGTGACCCCACCAATGCACACCCTTTCGTCACATGCAGGAGGCTTCCTTCTGGCTGCCTTGTGCAAGATATGCCCAACGGTTACTCCAAGGTTACTTGGGTAGAGCATTGGCAGTACGATGAGAACGTGCTGCACCCACTTTACCGTCCTATGGTGAACGCCGGAATGGGCTTCGGTGCTCATAGATGGACCTCCACCCTCCAAAGGCAATGCGAATGCTTGGCCATCCTCTTGTCCTCTACCATCCCTACTGATTATCACGCCACACTGAGCCAAGGTGGTCGGCGAAGCATGGTGAAGCTGGCACAACGCATGGTGGACAACTTCTGTTACGGGGTCGTCCCTTCGTCGGCCCGGAGGTGGGAAAGCCTTCATGTGGGGACGGTAGGAGATGACGTCAAGATTATGACTCGGAGGAACGAAGGAGAACCAGGCTATCCTCCCGGAGTCATGCTCAGTGCCGCCACTTCCTTCTGGCTGCCTTTTTCACGGCAAGGGTTGTTCGACTTCCTCCGTGACGAACGCCGGAGATTCGAGTGGGACGTATTGTCCAATGGCAATGGAACCGTGCAGGAAGTGGCTGTCATTGCAAAAGGACAGACACATGGTAACTGTGTTTCTCTTCTTCGGACCAACGGTGTTAACGGGAACGAGACCGGCATGGTGATACTGCAAGAGACATGGACGGATGCTACAGGATCAATGGTAGTTTATGCACCGGTTGATATGCAGTCGCTGAACGTGGTGATGAGTGGCGGCGATTCTTCGTACGTGGCTCTGTTGCCTTCTGGTTTTGCCATTCTTCCCGACGGTCCTAATAATGGCGGCCACAACGGGAGTCATCCTGGCGGTGACAGTGGGAGTGGTGGAAGCATACTTACAGTAGGGTTACAGATACTGATAAACAGCCTGCCATCATGGAAGCTGACGATGGAGTCCGTTGAAACTGTCAGCAATCTGATGACGACCACAGTGCAGAAGATCAAAGAGGCGGTGCGAGTTGTTGCATGA 2256 0.4925 MQKRKMDHQGHNVEMSLLGENFDPSLIARIRDDGYESRSGSDNFDGVSGEDDQDIAGDDNTPNQRSNKKYHRHTPHQIQELETFFKDCPHPDEKQRLELSRKLGLETKQVKFWFQNRRTQMKTQLERHENLILRQENDKLRAENSMMKEAMTNPICNNCGSPAIPGQISFEEHQLRIENARLKDELDRICALSNKFLGRPISTMALPSSNSSPELAIGTNNSNTFSGIGGIGVGSSFPMGIDMGMTMQMGNDQAEAERSMLIDLALSAMEELMKMAQGDNGPLWIRTLDGENEVLNLEEYVRIIPPCLGPKPPGYVTEATRDTGIVIINTLNLIETLMDPNRWVELFPGMIARAVPLDMISSGVGGTRSGTLLLLEAEMQMLSPLVPVRQTRLLRLCKQQAENLWAVVDVSVEIGRDPTNAHPFVTCRRLPSGCLVQDMPNGYSKVTWVEHWQYDENVLHPLYRPMVNAGMGFGAHRWTSTLQRQCECLAILLSSTIPTDYHATLSQGGRRSMVKLAQRMVDNFCYGVVPSSARRWESLHVGTVGDDVKIMTRRNEGEPGYPPGVMLSAATSFWLPFSRQGLFDFLRDERRRFEWDVLSNGNGTVQEVAVIAKGQTHGNCVSLLRTNGVNGNETGMVILQETWTDATGSMVVYAPVDMQSLNVVMSGGDSSYVALLPSGFAILPDGPNNGGHNGSHPGGDSGSGGSILTVGLQILINSLPSWKLTMESVETVSNLMTTTVQKIKEAVRVVA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0255 751 Gene3D - 55 139 - -
Lele46g0255 751 SUPERFAMILY Homeodomain-like 58 124 IPR009057 -
Lele46g0255 751 SUPERFAMILY Bet v1-like 509 744 - -
Lele46g0255 751 CDD homeodomain 68 124 IPR001356 GO:0003677
Lele46g0255 751 FunFam Homeobox-leucine zipper protein HDG1 51 140 - -
Lele46g0255 751 Coils Coil 118 153 - -
Lele46g0255 751 ProSiteProfiles START domain profile. 254 491 IPR002913 GO:0008289
Lele46g0255 751 ProSiteProfiles 'Homeobox' domain profile. 64 124 IPR001356 GO:0003677
Lele46g0255 751 Pfam START domain 264 488 IPR002913 GO:0008289
Lele46g0255 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 66 747 IPR042160 -
Lele46g0255 751 CDD START_ArGLABRA2_like 258 487 - -
Lele46g0255 751 Pfam Homeodomain 68 122 IPR001356 GO:0003677
Lele46g0255 751 MobiDBLite consensus disorder prediction 33 75 - -
Lele46g0255 751 SUPERFAMILY Bet v1-like 256 488 - -
Lele46g0255 751 SMART START_1 263 488 IPR002913 GO:0008289
Lele46g0255 751 ProSitePatterns 'Homeobox' domain signature. 99 122 IPR017970 GO:0000981|GO:0006355
Lele46g0255 751 SMART HOX_1 66 128 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0255 Lele-ChrLele46 1670033 1673410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0255 12 747 Homeobox Transcription Factor Family AT3G61150 53.446 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele46g0255 START 9.5e-42 CL0209