Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0252 ATGGGTTTCCTCCGGCGAATTTTCGGCGGCAAAAAGCCGGCCTCTCCGTCAGGAGCATCCCACAAGTCCGGCTCTGAACCCGTCAAGAGTAAACGGAGATGGAGGTTCATCAAACACAGCAAAGACAAATCCCAAAGTGCTACTTCTGATCTCAATCACATCGACCTTTCCACATCTTCGCTTCCATACAGTGATTCCTTGAACGCTAATAAACGTGCCATTGCAGTGGCTGCGGCGACGGCGGCCGTCGCGGAGGCCGCTCTGGCCGCCGCTCATGCAGCGGCGGAGGTGGTTAGACTCACGAATGGAGGAGGTGGAGGCGGTCCTGGTACAAGCCAGCACCGGTGGCCGGAAGAGATCGCCGCCGTTAAAATACAGTCGGCCTTTCGTGGTTATTTGGCAAAGAGAGCTCTGAGAGCACTAAAAGCATTGGTGAAGTTGCAAGCATTGGTAAGAGGTCACATTGTAAGAAAGCAAACTGCAGATATGCTGAGGCGCATGCAAACTTTGGTGAGGCTGCAGTCCCGTGCACGTGCAGGTCGCGTGCAGTTGTCCCACATCCTCCATTCTACCAAGTCTCCTCTCTCTCATCACCCTGTCCCTGAACATTATGAAACATCACTTAGATCCAATAGTACTAAATTTGAAGGATCCCCTCTCCTCAAGAGATGCAGTTCGAATGCAAATTATAGGGACATTGGCTCGGGGAGATCGAGGATTGTATCGCAATGGTACGACCAATGGATGGAAGAAAATGTTTGGAACAATCCCAGAGGAGAAGATGACGAGAATAGTGACAAAATTCTCGAAGTTGATACATGGAAGCCACACTTGACCTCCCATCAGAACGAGAATCGTTTGGCATATGGGTCTCCATCAAAGCGTTCAACAAAAAGTTTAAACCAAAGTCTCTTCTTCAGTTCCCTCAAGTTTCAGAAGAGAAAACAAGAGAAAGCTTCAACGAACAACAGCAAAGAACTGTCATCATCAGCACATTCATATCAGAACAGTCCATCAGAGTCATTTTCTGCTTCAAGGAGAAGATCGGGTGCTTTCACGCCCACAAGAAGTGAGTGTGGCTACTTTGGTCACCCAAATTACATGGCCAACACTGAGTCATCTCGAGCCAAAGCTAGATCTGTGAGTGCCCCAAGGCAAAGACTTTGGGATTCTGCGGGGAATAATTCTGATAGGCATAGTGCTGATTTCGGAACCCAATGTTTTACATCTTCAAGCCGCTTCAACAGAGTCTTGAGTACCCATCTAAGGTGA 1272 0.4866 MGFLRRIFGGKKPASPSGASHKSGSEPVKSKRRWRFIKHSKDKSQSATSDLNHIDLSTSSLPYSDSLNANKRAIAVAAATAAVAEAALAAAHAAAEVVRLTNGGGGGGPGTSQHRWPEEIAAVKIQSAFRGYLAKRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARAGRVQLSHILHSTKSPLSHHPVPEHYETSLRSNSTKFEGSPLLKRCSSNANYRDIGSGRSRIVSQWYDQWMEENVWNNPRGEDDENSDKILEVDTWKPHLTSHQNENRLAYGSPSKRSTKSLNQSLFFSSLKFQKRKQEKASTNNSKELSSSAHSYQNSPSESFSASRRRSGAFTPTRSECGYFGHPNYMANTESSRAKARSVSAPRQRLWDSAGNNSDRHSADFGTQCFTSSSRFNRVLSTHLR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0252 423 Gene3D - 117 171 - -
Lele46g0252 423 MobiDBLite consensus disorder prediction 372 397 - -
Lele46g0252 423 MobiDBLite consensus disorder prediction 1 32 - -
Lele46g0252 423 MobiDBLite consensus disorder prediction 280 297 - -
Lele46g0252 423 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
Lele46g0252 423 Pfam IQ calmodulin-binding motif 142 159 IPR000048 GO:0005515
Lele46g0252 423 PANTHER IQ-DOMAIN 5-RELATED 28 402 - -
Lele46g0252 423 MobiDBLite consensus disorder prediction 274 297 - -
Lele46g0252 423 SMART iq_5 140 161 IPR000048 GO:0005515
Lele46g0252 423 SMART iq_5 117 139 IPR000048 GO:0005515
Lele46g0252 423 MobiDBLite consensus disorder prediction 322 352 - -
Lele46g0252 423 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Lele46g0252 423 Pfam Protein of unknown function (DUF4005) 329 402 IPR025064 -
Lele46g0252 423 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Lele46g0252 423 MobiDBLite consensus disorder prediction 315 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0252 Lele-ChrLele46 1649504 1651899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0252 1 390 IQD Protein Family AT5G07240 45.588 4.63e-58 195