Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0248 ATGTGTCATACCTGCAAGTGTAATCTATGGGACAGTTTGTCAGCTTCGTATTTATATACTACACTTACTCCACTGCCATTTGCAACTGCTACAAGTGATCATGAAGCTTTGGAAACTCTTAGGGAATTCAGAGGCTTCTTCGACCTCGTCATCACCGACCTTAACATTCGAGGAATGAATGGATTTGAGCTCCAAAAGACTGTCAAAAGCGAATTCCATCTTCCAGTCATCATCATGTCTGAAGATGGGAGGAAGAGTGTGATGTCGAGGAGTTTAGAGCAAGGAGCAGCGTTTTGCTTAGTGAAACCAGTGCGAAGAGAGGACTTGAGAGATGTGTGGCAGTATGCTGTGGCTGGCAGGAGAGAGAAACTAAGAGTTGAGAATGGCAGAATTGTATCAGTAAGAGAAGAAGAAGAAGAAGAAGGAGACTCATCATCATCACCAGCCATTAATATAGCCTCTACACAGGATTCAACATCGCCTAAAAAGCAAAGGAAGAAGTCTTGCAAGAGAAAACGCAGTGATGATGAGGTGGTTGATAATGAAGAACTCATATTCTGTGGTCCAAAGAGGTCCAAGATTTTTTGGACTGTTAATCTTCACAAGAAAGGAATCCTTGAGGGATTACCTGAGAGAGCTTTGAGGTCAAGGTTTGCTATGGGGCTTCCCACAGATCTCATCAGAGACATCCAAAAAAGACTCACTCGTTTTCATGAAATTAGTTATTATCATCAACCTTACAGTACTTACGGAAATCCCCAGATTCCTCAAAATCCTCCTACAACCAGACTCTTTCTCGCCAATCAAACCAGACTGGCCCCACCAAACTACCATGGTGGGACCAATCATACTTACGGAAACTTCCAACAGCCTCATTATCATAATCTTCATCGCCCCATCGTAAATGGAGGAGGGTTCATGACTTCTGCAAATAATGGTTTGATGAGTAACTATTCCAATCCCTCACTGGTGGGGAACAACAGAAGCTTCAACCATGGCCCAACTAATTATTATAATAGTAATAACAATCCTGGGATGTTAGTGCCTTATGGAAGCTCTGGCCTGCAACCAAGTCCTGGGACATGTTATAATAACCACCATGGAACTCAGCTGATGAACAACAATAATAACCGTGGGATGACAGTGCCTTATGGAAGCCATGGCTTCCAACCAAATCCTAGTACTTACTATAATAACCACTATGGAACTCAACTGAACAACGACAATGCTTCTCTTACAGTTGATGAGTTGAATGTTCAGAATGTTGGTTATACAGTTCATAACCGTAATGGGAGTGCTTCAAATAATGCAGTTGTGCCTGTCTCATCATCCTCAGTTGCGAATGTCCGTGTTGATGAACCAACTCGAGCAAACATATCTGCAAGTCTTAATCCATCTTTCCCTAATCAGCAGTCAATGAATGGTATTAGGAATGCTGCCACTTCAGTGAATCAGCGGGAAGTTGGTCAAATGGATGATCTTAATGAACTCTTCCTCATGCTAGACGACATGGTTTCTCTTGACAAGACTGCAGAGAGCCCTCGTGCTGGTGAACGTTCAACTTCTGACATTCTTAGCTCCTTCAATGTTGAAGACTACATTGAGCTGTTGCAAGGAGATGGTGATCATGTGAATGCTCAAACAAGGGAAAGAAGCATCAGTGTTCTGCCAAACAAGTCCTCGTCATCTTGCACCAACGAAAACCCTAATATGGATTGGGACATGGATCTCATTGAAACGTTGTTCTTCGATGCTGCAGATCCCAGCCTGAAGAAATTCGCATTTTGCACATTCGATTCAAGCTCTCTGGTTCCACCACAAGTTTTTTATCCTCTGAACTTGTGTGCTGAATATTGCGGCTTAGTTTGATCCATTTCAGAACGTTCCCAGGGTGAAGAATCAGGCCTGGCTCTAGAGGGCTACTTAGACTCCAGTCAACAAGGGGCGGTGCCCCCCATGGCACCTTCTCGGGTGGCTGGAGGGTTAGCCCATTCATCATCAAGTTCTGGAATATTCTATCAAGGAGATGGGCAATCACAGAATGCTGTTGATTCTCGCTTTAATTCGTGTTTTGGTAACACATCCAACTCATTTCCTGGAACTGGACGTTCAAATCTGGGTCCAGTTTCTGGTGACACGAGTAATGCAATTCTAAACAGTGTGGCAAATTCAGGGCTAAGTGTTGGAGCCAGTTCATTAGTCACGGATGCAAACTCTGCACTATCTGGGGGACCCCGTTTGCAGAGAAGCGCTAGCAATAACATGGAATCCTACTTACGTTTACCTGCATCACCCATGTCATTCTCGTCAAATAATATTAGCATTTCAGGGTCATCAGTTATGGATGGTTCTTCTGTAGTACAGCAGAGCTCTCATCAAGACCAGAATGTTCAACAACTGCAAAAGAATCATGAGCAAATGCAGGGTGCTTCTAGTGCAACATCTCTGCCTGCAGCTCAAACTGGCCCAGCTCCAGTGCCGATGGGTAAGCGAGGACCTGGATCTGGATCTTTGATACAAGATCCAAATAATCTATCCCAGATGCATAAGAAACCTCGGATTGATATCAAGCAAGAAGATATAATGCATCAGCAGGTAATACAACAGCTTCTTCAGAGGCAGGACCCCATGCAGTTCCAGGGTCGTAATCCCCAACTACAGGCTTTGCTCCAGCAGCATAGACTTAGGCAACAGCAACAGCAGCAGCAGCAAATCCTTCAGTCAATGCCACAGTTACAGGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGAGCAAAGAAGCGGTGGTGTTTGTCATTATATGATAATGTCGGGCAACATACTCTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCAGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCCAGACTTAACAAAATCAAATTTGGCAGTGGGGTGATTGATGAACTTATGTTTTTGGACTTGCCCCGTGAGCATAGATTTCCTTCTGGTTTAATGATGCTAGAATATGGAAAGGCGGTTCAAGAGAGCGTGCATGAACAGTTGCGTGTTGTTCGTGTGGGTCAACTTCGCATCTTATTTACACAAGATCTGAAGATACTATCTTGGGAGTTTTGTGCAAGACGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAGCCAATTGGTTCAAGTGGCTGAAAAGTTCCAGCGTTCTATTACTGAAAGTGGATCTGATGGGATTTCTCAGCAGGATTTGCAGACAAACAGCAACATGGTAATAACAGCTGGGTGTCAGCTGGCAAAGAGTTTGGACATACAGTCTCTGAACGACTTGGGTTTCTCAAAACGATATGTGAGGTGTTTGCAGATATCGGAGGTTGTGAATAGCATGAAGGATCTGATGGATTTCTGCCGAGACCACAAAGTTGGGGCACTTGAGGGCTTGAAAAATTATCCTAGACATGCAACTGCGGCCAAGCTCCAGATGCAGGAGATGGAACAGTTAGCGAATGTTCAAGGTCTGCCAACTGACCGGAACACACTTAATAAGCTAATGGCATTGCATCCTGGATTGAATAACCAAATCAACAACAACCCTAATCTTGTTAATCGCGGTGCTTTGAGTGGATCTGCACAGGCTGCATTGGCACTGACTAACTACCAAAATATCCTCATGAGGCAAAACTCCATGAATTCAACCCCCAACTCACTTCAGCGAGAAGCATCTCCCTCCTTCAATAATTCAAACCAGAGCCCCTCTTCACAGTTTCAAGGTGCTGCTGCTGCTGCTTTGCTTCCAGGCTCCATGCAGAATTTACCTGTCAGCGGTTTCTCAAGTCCCCATCTAACTCCACAGCAGCAGCGGCTTCAACAACTCAAACAGCACTCATTAAGTGCGAATAGCTTGCTGCAACAAAATCATCCACAGGGCTCCCAATCAAATCAGGCTCTACCACCCCAGATGCTCCAGCAACTAGTTCAGGAATTGTCGAATACCAGCGGAGTTCAACAGCAGTTCCGTGCTGGACCCAACTCTAACACAAATAATGGTTTGAGTTTTGGAGGTAACCCCCCACCAGCATCTGGAGGAACTTCCAATGTTTCAGGAAGTAACGGACCTGCTGCTCCGGGCAGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAATGGATTCAACCAAAGAGCATCTGATATACCACAAAATCTCCATCTGCAAGATGTGGTTCAGGATATCGCCCGCGAGTTCACTGATAATGGCTTCTTTAATGGTGACCTCGATGACTATGGTTGGAAGGCATGA 4356 0.4477 MCHTCKCNLWDSLSASYLYTTLTPLPFATATSDHEALETLREFRGFFDLVITDLNIRGMNGFELQKTVKSEFHLPVIIMSEDGRKSVMSRSLEQGAAFCLVKPVRREDLRDVWQYAVAGRREKLRVENGRIVSVREEEEEEGDSSSSPAINIASTQDSTSPKKQRKKSCKRKRSDDEVVDNEELIFCGPKRSKIFWTVNLHKKGILEGLPERALRSRFAMGLPTDLIRDIQKRLTRFHEISYYHQPYSTYGNPQIPQNPPTTRLFLANQTRLAPPNYHGGTNHTYGNFQQPHYHNLHRPIVNGGGFMTSANNGLMSNYSNPSLVGNNRSFNHGPTNYYNSNNNPGMLVPYGSSGLQPSPGTCYNNHHGTQLMNNNNNRGMTVPYGSHGFQPNPSTYYNNHYGTQLNNDNASLTVDELNVQNVGYTVHNRNGSASNNAVVPVSSSSVANVRVDEPTRANISASLNPSFPNQQSMNGIRNAATSVNQREVGQMDDLNELFLMLDDMVSLDKTAESPRAGERSTSDILSSFNVEDYIELLQGDGDHVNAQTRERSISVLPNKSSSSCTNENPNMDWDMDLIETLFFDAADPSLKKFAFCTFDSSSLVPPQVFYPLNLCAEYCGLVXSISERSQGEESGLALEGYLDSSQQGAVPPMAPSRVAGGLAHSSSSSGIFYQGDGQSQNAVDSRFNSCFGNTSNSFPGTGRSNLGPVSGDTSNAILNSVANSGLSVGASSLVTDANSALSGGPRLQRSASNNMESYLRLPASPMSFSSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQKNHEQMQGASSATSLPAAQTGPAPVPMGKRGPGSGSLIQDPNNLSQMHKKPRIDIKQEDIMHQQVIQQLLQRQDPMQFQGRNPQLQALLQQHRLRQQQQQQQQILQSMPQLQDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGQHTLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNKIKFGSGVIDELMFLDLPREHRFPSGLMMLEYGKAVQESVHEQLRVVRVGQLRILFTQDLKILSWEFCARRHEELLPRRLVAPQVSQLVQVAEKFQRSITESGSDGISQQDLQTNSNMVITAGCQLAKSLDIQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDHKVGALEGLKNYPRHATAAKLQMQEMEQLANVQGLPTDRNTLNKLMALHPGLNNQINNNPNLVNRGALSGSAQAALALTNYQNILMRQNSMNSTPNSLQREASPSFNNSNQSPSSQFQGAAAAALLPGSMQNLPVSGFSSPHLTPQQQRLQQLKQHSLSANSLLQQNHPQGSQSNQALPPQMLQQLVQELSNTSGVQQQFRAGPNSNTNNGLSFGGNPPPASGGTSNVSGSNGPAAPGRSNSFKAASNSDSSAAGGNNGFNQRASDIPQNLHLQDVVQDIAREFTDNGFFNGDLDDYGWKA 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0248 1451 MobiDBLite consensus disorder prediction 145 159 - -
Lele46g0248 1451 Pfam Response regulator receiver domain 28 111 IPR001789 GO:0000160
Lele46g0248 1451 MobiDBLite consensus disorder prediction 1238 1417 - -
Lele46g0248 1451 MobiDBLite consensus disorder prediction 770 819 - -
Lele46g0248 1451 MobiDBLite consensus disorder prediction 272 291 - -
Lele46g0248 1451 Gene3D - 21 181 - -
Lele46g0248 1451 MobiDBLite consensus disorder prediction 1238 1269 - -
Lele46g0248 1451 PANTHER LIM DOMAIN-BINDING PROTEIN 694 1440 IPR029005 -
Lele46g0248 1451 Pfam LIM-domain binding protein 912 1160 IPR029005 -
Lele46g0248 1451 MobiDBLite consensus disorder prediction 1282 1417 - -
Lele46g0248 1451 MobiDBLite consensus disorder prediction 135 171 - -
Lele46g0248 1451 ProSiteProfiles Response regulatory domain profile. 1 117 IPR001789 GO:0000160
Lele46g0248 1451 SUPERFAMILY CheY-like 28 123 IPR011006 -
Lele46g0248 1451 MobiDBLite consensus disorder prediction 770 852 - -
Lele46g0248 1451 SMART REC_2 10 113 IPR001789 GO:0000160
Lele46g0248 1451 MobiDBLite consensus disorder prediction 359 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0248 Lele-ChrLele46 1605704 1622508 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0248 913 1165 C2H2 Transcription Factor Family AT1G43850 59.289 1.83e-93 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele46g0248 LIM_bind 2.5e-52 No_clan