Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0247 ATGGCACCTTCTCGGGTGGCTGGAGGGTTAGCCCATTCATCTAGTTCTGGAATATTCTATCAAGGAGATGGGCAATCACAGAATGCTGTTGACTCTCACATAAGCTCATGTTTTGGTAACACATCCAACTCATTTCCTGGAACTCGACGTTCAAATCTGGGTCCAGTTTCTGGTGACATGAGTAGTGCAATTCTAAACAGTGTGGCAAATTCAGGGCCAAGTGTTGGAGCAAGTTCATTAGTCACAGATGCTAACTCTGCACTATCTGTGGGACCTCGTTTGCAGAGAAGCGCTAGCAATAACACAGAACCATACTTGCGTTTACCTGCATCGCCCATGTCATTCTCCTCAAATAATATTAGTATTTCGGGGTCATCAGTTATAGATGGTTCTTCTGTAGTAAAACAGAGCTCTCATCAAGACCAGAATGTTCAACAACTGCAAAAGAATCATGAGCAAATGCAGGGTGCTTCTAGTGCAACTTCTCTGCCTGCAGCTCAAACTGGCCCAGCTCCAGTGCCAATGGGTATGCGAGGACCTGGATCTGCATCTTTGATACAAGATCCAAATAATCTATCCCAGATGCATAAGAAACCTCGGATTGATATCAAGCAAGAAGATATAACGCATCAGCAGGTAATACAGCAACTTCTTCAGAGGCAGGACCCCATGCAGTTCCAGGGTCGTAATCCCCAACTACAGGCTTTGCTCCAGCAGCAGAGACTGAGGCAACAGCAACAGCAGCAACAAATCCTTCAGTCAATGCCACAGTTACAGAGAGCTCACCTGCAACAGCAGCAGCAGCAACATATGCAATTGAGGCAGCAATTACAACAACAAGCAACGCAGCCGTTGTCTTCCATCAAGCGCCCATATGATAGTGGTGTGTGTGCCCGTCGTTTGATGCAATACTTATATCATCAAAGGCAGCGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTAGCTGAATATTACTCTCCTCATGCAAAGAAGCGGTGGTGTTTGTCATTATATGATAATGTCGGGCAACATACTCTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCAGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCGAGACTCAACGAAATCAAATTTGGCAGTGGGGTGATTGATGAACTTATGTTTTTGGACTTGCCTCGTGAGTATAGATTTCCTTCTGGTTTAATGATGTTAGAATATGGAAAGGCAGTTCAAGAGAGCGTGCATGAGCAACTTCGTGTTGTTCGTGAGGGTCAACTTCGCATCATATTTACACAAGATCTGAAGATATTATCTTGGGAGTTTTGTGCAAGACGCCATGAAGAACTTATTTCTCGAAGGTTGGTTGCACCACAGGTCAGCCAATTGGTTCAAGTGGCTGAAAAGTGCCAGCGTTGTATTCCTGAAAGTGGATCCGATGGGATTTCTCAGCAGGATTTGCAGACAAACAGCAATATGGTAATAACGGCTGGGTGTCAGCTGGCAAAGAGTTTGGACTTACAGTCTCTGAATGACTTAGGTTTCTCAAAACGATATGTGAGATGTTTGCAGATATCAGAGGTTGTGAATAGCATGAAAGATCTGATGGATTTCTGCCAAGAGCGCAAAGTTGGGGCACTTGAGGGCTTGAAAGATTATCCTAGGCATGCAACTGCAGCCAAGCTCCAGATGCAAAAGATGCAGGAGATGGAACAGTTAGCGAATGTTCAAGGTCTGCCAACTGACCGGAACACCCTTAATAAGCTAATGGCTTTGCATCCTGGATTGAATAACCAAATCAACAACCACCCTAACCTTGTTAATCGTGGTGCTTTAAGTGGATCTGCACAAGCTGCATTGGCACTGTCTAACTACCAGAATCTCCTCACTAGGCAAAACTCCATAAACTCAAGCCCTAACTCGCTTCAGCAGGAAGCATCTTCTTCCTTCAATAATTCAAACCAGAGCCCCTCTTCACACTTTCAAGGTGCCGCTACTGCTTTGCCTCCAGGCCCCATGCAGAATTTACCTGTCAGTGGTTTCTCAAGTCCCCATCTATCTCCACAGCAGCAACAGCAGCTACAACAATTTAAACAGCGCTCATTAAGTGGGAATAGCTTACTGCAACAAAATCATCAACAAGGCTCCCACACAAATCAGGCTCTACCTCCCCAGATGCTCCAGCAGCTAGTTCAGGAATTGTCGAATAACAGCAGTGGCGGAGGAGTTCAACCGCAGTTCCATGCTGGACCCAACCCCAATGGAAGTATTGCCACTAATGGTTTGGGTTTCGGAGGTAACCCTCCACCAACAACTGGAGGAACTTCCAATGTTTCAGGAAGTAACGGACCTGCTGCTCCGAGCAGGAGCAACAGCTTCAAAGCTGCTTTAAACAGTGATTCTTCTGCAGCTGGTGGCAATAGTGGATTCAACCAAAGAACATCCGATATACCACAAAATCTCCGCCTCCAAGATGTGGTTCAGGATATTGCCCGCGAGTTCACCGATAATGGCTTCTTTAACAGTGACTTCGACGACTATGGGTGGAAGGCATGA 2583 0.4561 MAPSRVAGGLAHSSSSGIFYQGDGQSQNAVDSHISSCFGNTSNSFPGTRRSNLGPVSGDMSSAILNSVANSGPSVGASSLVTDANSALSVGPRLQRSASNNTEPYLRLPASPMSFSSNNISISGSSVIDGSSVVKQSSHQDQNVQQLQKNHEQMQGASSATSLPAAQTGPAPVPMGMRGPGSASLIQDPNNLSQMHKKPRIDIKQEDITHQQVIQQLLQRQDPMQFQGRNPQLQALLQQQRLRQQQQQQQILQSMPQLQRAHLQQQQQQHMQLRQQLQQQATQPLSSIKRPYDSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPHAKKRWCLSLYDNVGQHTLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPREYRFPSGLMMLEYGKAVQESVHEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELISRRLVAPQVSQLVQVAEKCQRCIPESGSDGISQQDLQTNSNMVITAGCQLAKSLDLQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCQERKVGALEGLKDYPRHATAAKLQMQKMQEMEQLANVQGLPTDRNTLNKLMALHPGLNNQINNHPNLVNRGALSGSAQAALALSNYQNLLTRQNSINSSPNSLQQEASSSFNNSNQSPSSHFQGAATALPPGPMQNLPVSGFSSPHLSPQQQQQLQQFKQRSLSGNSLLQQNHQQGSHTNQALPPQMLQQLVQELSNNSSGGGVQPQFHAGPNPNGSIATNGLGFGGNPPPTTGGTSNVSGSNGPAAPSRSNSFKAALNSDSSAAGGNSGFNQRTSDIPQNLRLQDVVQDIAREFTDNGFFNSDFDDYGWKA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0247 860 MobiDBLite consensus disorder prediction 131 166 - -
Lele46g0247 860 MobiDBLite consensus disorder prediction 642 709 - -
Lele46g0247 860 Coils Coil 260 283 - -
Lele46g0247 860 MobiDBLite consensus disorder prediction 642 672 - -
Lele46g0247 860 MobiDBLite consensus disorder prediction 744 827 - -
Lele46g0247 860 MobiDBLite consensus disorder prediction 131 190 - -
Lele46g0247 860 MobiDBLite consensus disorder prediction 685 709 - -
Lele46g0247 860 Pfam LIM-domain binding protein 300 560 IPR029005 -
Lele46g0247 860 PANTHER LIM DOMAIN-BINDING PROTEIN 41 849 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0247 Lele-ChrLele46 1600399 1605536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0247 288 566 C2H2 Transcription Factor Family AT1G43850 57.706 1.48e-106 347