Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0242 ATGAAGAGGAAAAGCAAGCAAGGAAAGGACGGGAAACACATCTCTGAGAATGTAGGCGAGGGACCTCTAAGGATTCTTAACCCAGCAGTGACTGGAAACATGAGAAATGGTGAAGTGAGGAGGAGTGCTGGGATAGTTGCAACTGCTGCAAGTGGTTATGAAGCTTTGAAGACTCTCAGGAAATTCAGAGGCTTCTTCGACCTCGTCATCACCGACCTTAATATTCGAGGAATGAATGGATTTGAGCTCCAAAAGCGTGTCAAAAGCGAATTCCATCTTCCAGTCATCATTATGTCTGCAGATGGGAGGAAGAGTGTGATGTCGAAGAGTTTAGAGCAAGGAGCAGCGTTTTGCTTAGTGAAACCAGTTCGAAGAGAGGACTTGAGAGATGTGTGGCAGTATGCTGTGGCTGGCAGGAGAGAGAAACTCAGAGTTGAGAATGGCAAAATTGTATCAGTAAGCGAAGAAGAAGAAGGAGAAGCAGGAGACTCATCATCGTCACCAGCGGTTAACATAGCCTCTACACAGAATTCAACATCGCCTAAAAAGCAAAGGAAGAAGTACGGAGCCAGAAAACGTAGCGAGGTGGTAGATAATCAAGAACTCGCATTCTGTGGTCCAAAGAGGTCCAAGATTTCCTGGACTGTTAATCTTCACAGTCGCTTCTTGTTGGCCTTAAGGCACCTTGGCATGGACAAGAAAGGAATCCTTGAGGGATTACCTGAGAGAGCTTTGAGGTCAAGGTTTGCTATGGGGCTTCCCACAGATCTCATCAGAGACATCCAAAAAAGACTCACTCGTTTTCATGAAATTAGTTATTATCATCAACCTTACAGTACTTACGGAAATCCCCAGATTCCTCAAAATCCTCCAACAACTAGACCCTTTCTCGCCAATCAAACCAGACTGGCCCCACCAGACTACCATGGTGGGACCAATCATACAAACGGAAACTTCCAACAGCCCCATTATCATAATCTTTATCCCGCTATCGTAAATGGAGGAGGGTTCATGACTTCTGCAAATAATGGTTTGATGAGTAACTATTCCAATCCCTCACTGGTGGGGAAAAACAGAAGCTTCAACTATGGCCCAACTAATCATTATAATAATAATAACAATCATGGGATGTTAGTGCCTTATGGAAGCTCTGGCCTGCAACCAAGTCCTGGGACATATTATAATAACCACCATGGAACTCAACTGATGAACAACAATAATAACGGTGGGACGACAGTGCCTTATGGAAGCTATGGCTTCCAACCAAATCCTAGTACTCACTATAATAACCACTATGGAACTCAACTGAACAACAACAACAACGGTTCTCTTACAGTCGTTGCGTTGAATGGAATTCAGAATGTTGGTTATACAGGTCATAACAGTAATGGGAACGCTTCAAATAATGCAATTGTGCCTGTCTCATCCTCACTTGTGAGTCTGCCATCTTTGCCTCAGCAGTCAATTAATGGTACTAGGAAAGCTGTCACTTCAGTGAATCAGCAGGAAGCTGCCGAAATGGATGATCTTAACGAACTTTTCCTCATGTTAGACGATATGGTTCTTCTTGATGAGACTGCAAAGGGCGCTCGTGATGGTGTACGTTCAAGTTCTGACATTCTTAGCTCCTTCAATATTGAAGACTACATTGAGCTGGAAGATGGTGGTCATGTGGGCTCTCAAACAAATGAAAGAAGCGTCAATGTTCTGCTTGACAATGACAAGTCCTCATCTTGCACCAGTGAAAACCCTAATTTGGTGGCGAGGAAAGATACATCCACAAACTTGGAACTATTGGATATGTTCTTGGCGGAGCAGGCTAATTCTTCGTCGGCAGGAAACTCAGCTCCTCAAGAGCAGGCAAGCCATCTTATGAAAGATTTGTTTGATTGGGACATGGCTCTCATTGAAACGTTGTTCGATGCTGCAGATCCCAGCCAGAAGTGA 1947 0.4412 MKRKSKQGKDGKHISENVGEGPLRILNPAVTGNMRNGEVRRSAGIVATAASGYEALKTLRKFRGFFDLVITDLNIRGMNGFELQKRVKSEFHLPVIIMSADGRKSVMSKSLEQGAAFCLVKPVRREDLRDVWQYAVAGRREKLRVENGKIVSVSEEEEGEAGDSSSSPAVNIASTQNSTSPKKQRKKYGARKRSEVVDNQELAFCGPKRSKISWTVNLHSRFLLALRHLGMDKKGILEGLPERALRSRFAMGLPTDLIRDIQKRLTRFHEISYYHQPYSTYGNPQIPQNPPTTRPFLANQTRLAPPDYHGGTNHTNGNFQQPHYHNLYPAIVNGGGFMTSANNGLMSNYSNPSLVGKNRSFNYGPTNHYNNNNNHGMLVPYGSSGLQPSPGTYYNNHHGTQLMNNNNNGGTTVPYGSYGFQPNPSTHYNNHYGTQLNNNNNGSLTVVALNGIQNVGYTGHNSNGNASNNAIVPVSSSLVSLPSLPQQSINGTRKAVTSVNQQEAAEMDDLNELFLMLDDMVLLDETAKGARDGVRSSSDILSSFNIEDYIELEDGGHVGSQTNERSVNVLLDNDKSSSCTSENPNLVARKDTSTNLELLDMFLAEQANSSSAGNSAPQEQASHLMKDLFDWDMALIETLFDAADPSQK 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0242 648 SMART REC_2 23 132 IPR001789 GO:0000160
Lele46g0242 648 MobiDBLite consensus disorder prediction 281 299 - -
Lele46g0242 648 ProSiteProfiles Response regulatory domain profile. 21 136 IPR001789 GO:0000160
Lele46g0242 648 MobiDBLite consensus disorder prediction 281 316 - -
Lele46g0242 648 MobiDBLite consensus disorder prediction 164 183 - -
Lele46g0242 648 MobiDBLite consensus disorder prediction 154 192 - -
Lele46g0242 648 SUPERFAMILY CheY-like 46 141 IPR011006 -
Lele46g0242 648 Gene3D - 39 243 - -
Lele46g0242 648 PANTHER TWO-COMPONENT RESPONSE REGULATOR 43 238 IPR045279 GO:0009736
Lele46g0242 648 CDD REC_typeB_ARR-like 46 136 - -
Lele46g0242 648 Pfam Response regulator receiver domain 44 130 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0242 Lele-ChrLele46 1537840 1544622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0242 55 238 Response Regulator Gene Family AT3G16857 35.294 1.53e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele46g0242 Response_reg 7.3e-17 CL0304