Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0239 ATGGATAGCAACCCTCCTCCTCCAAGCTTGCCTCAACAAGAACAATCTTCTGCTTCTTCGCCTTCTGTTTTGCAAGTGCCTTCGTCTCATGAGTCGTCTTCTTCTCCGAGGATGGTGAGATCGCCGGGTGGCTCGTCGTCATCGGGTCAGCATACCAGCAGGAGGCACGCCACGTTCCGGGGAATCCGGAGCCGGAGTGGGAAATGGGTGTCGGAGATACGGGAGCCTCGAAAAACCACGCGCATTTGGCTGGGGACGTATCCGACGCCGGAGATGGCTGCCGCCGCGTATGACGTGGCGGTTCTTGCATTGAAAGGGCCTGATACCACCCTCAACTTCCCCAATTTGATCCTCTCCTACCCGATCCCGGCGTCATTGTCGGCCACGGATATTCGTGCGGCGGCGTCAGCAGCTGCCGAGGCCAGGCTGGTGAGGTCTGCGGAAACCGGTGGACAAAAAGCCGGAGAAGGAAGAGGAGGAAGCCAGGGCGAGGGCCGGAGCGGAGCCGGAGAAGTGACGGAGAAAAGTGAGGAATTTATTGACGAGGACGAGCTATTGAATATGCCGAGTTTGCTGGATGACATGGCGAGGGGAATGCAGGTGAGTCCGCCGAGGATGAAGTCACCGTACGCTTCGGATGATTCGCCGCCGAATTCAGATCATGGAGATAGCCTCTGGAGTTTTTGA 687 0.5764 MDSNPPPPSLPQQEQSSASSPSVLQVPSSHESSSSPRMVRSPGGSSSSGQHTSRRHATFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGPDTTLNFPNLILSYPIPASLSATDIRAAASAAAEARLVRSAETGGQKAGEGRGGSQGEGRSGAGEVTEKSEEFIDEDELLNMPSLLDDMARGMQVSPPRMKSPYASDDSPPNSDHGDSLWSF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0239 228 SUPERFAMILY DNA-binding domain 59 115 IPR016177 GO:0003677
Lele46g0239 228 MobiDBLite consensus disorder prediction 146 228 - -
Lele46g0239 228 ProSiteProfiles AP2/ERF domain profile. 58 114 IPR001471 GO:0003700|GO:0006355
Lele46g0239 228 MobiDBLite consensus disorder prediction 212 228 - -
Lele46g0239 228 MobiDBLite consensus disorder prediction 1 71 - -
Lele46g0239 228 Pfam AP2 domain 60 106 IPR001471 GO:0003700|GO:0006355
Lele46g0239 228 SMART rav1_2 58 120 IPR001471 GO:0003700|GO:0006355
Lele46g0239 228 MobiDBLite consensus disorder prediction 13 55 - -
Lele46g0239 228 Gene3D AP2/ERF domain 58 115 IPR036955 GO:0003700|GO:0006355
Lele46g0239 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 35 199 - -
Lele46g0239 228 CDD AP2 59 116 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0239 Lele-ChrLele46 1523952 1524638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0239 53 228 AP2-EREBP Transcription Factor Family AT5G52020 58.989 2.32e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele46g0239 AP2 2.6e-09 CL0081