Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0238 ATGAGAAACACAGCTGGTTCAAGCTCAAGCCCCACCACCCCATCCATTTTCCTTAACCATTGTTTAAAGCGTGGTCACTCTCCCAGCCCTAACCTAGCTGTCTCCGTTCAAGCTACCCTACTCATTTTCTTCATCGATTCACACTTGAAAGGACACGAGGTTCAAGCTTCAGTGATTCCTATGTTTTCATTCACTTCTTCAGACCCATATCCGCTTAGGTCCAGATATGCTAGTGATTTAGAGGTGGTGGAGTACACGTCCTCGCCGGCTTCCGATTGTGGCAGTGGCAACGGAGTTCGTTCTTTGGTTTTGTCCGACGAGGAGGTTTTGTTGGCTGCGACTCATCCGAAGAAACGTGCGGGGAGGAAAAAGTTCCGTGAGACTCGTCATCCGGTGTACAGGGGTGTTCGGAGGAGGAACTCCGGCAAGTGGGTGTGTGAAGTGCGGGAGCCCAATAAGAAAACAAGAATTTGGCTGGGGACGTTCCCCACGGCAGATATGGCTGCGAGGGCCCACGACGTGGCGGCGATCGCTCTGCGTGGCCGGTCAGCTTGTCTTAACTTTGCAGACTCTGCTTGGCGGTTGCCACTGCCGGCCTCAACTGAAGCCAAGGATATTCAGAAGGCAGCGGCAGAAGCTGCAGAGGCATTCCGGCCAGGGACAGAATCGGAGAGCGAGGAATTGAGGGCGGAAAATGCAGAGGCGACGACCAGCACGGCGGCCCCAGGGGCGGAGGAGCAAAGTATATTCATAATGGATGAAGAAGGAGTTCCGGGGATGCCGGAGTTGCTTAGGAACATGGCGGACGCGGTGCTGATGTCGCCTACTCATTGCTTTGGGGATCAGTACGATGGTGCTGACGTGGAAGTGGATGATGCTGAGGTGTCATTATGGAGTTATTCAATTTAA 909 0.5347 MRNTAGSSSSPTTPSIFLNHCLKRGHSPSPNLAVSVQATLLIFFIDSHLKGHEVQASVIPMFSFTSSDPYPLRSRYASDLEVVEYTSSPASDCGSGNGVRSLVLSDEEVLLAATHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTADMAARAHDVAAIALRGRSACLNFADSAWRLPLPASTEAKDIQKAAAEAAEAFRPGTESESEELRAENAEATTSTAAPGAEEQSIFIMDEEGVPGMPELLRNMADAVLMSPTHCFGDQYDGADVEVDDAEVSLWSYSI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0238 302 Pfam AP2 domain 131 181 IPR001471 GO:0003700|GO:0006355
Lele46g0238 302 PRINTS Ethylene responsive element binding protein signature 133 144 IPR001471 GO:0003700|GO:0006355
Lele46g0238 302 PRINTS Ethylene responsive element binding protein signature 155 171 IPR001471 GO:0003700|GO:0006355
Lele46g0238 302 Gene3D AP2/ERF domain 132 190 IPR036955 GO:0003700|GO:0006355
Lele46g0238 302 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 100 300 IPR045277 GO:0003700
Lele46g0238 302 CDD AP2 133 191 IPR001471 GO:0003700|GO:0006355
Lele46g0238 302 SUPERFAMILY DNA-binding domain 132 191 IPR016177 GO:0003677
Lele46g0238 302 SMART rav1_2 132 195 IPR001471 GO:0003700|GO:0006355
Lele46g0238 302 FunFam Ethylene-responsive transcription factor 2 131 190 - -
Lele46g0238 302 ProSiteProfiles AP2/ERF domain profile. 132 189 IPR001471 GO:0003700|GO:0006355
Lele46g0238 302 MobiDBLite consensus disorder prediction 216 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0238 Lele-ChrLele46 1511578 1512647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0238 111 300 AP2-EREBP Transcription Factor Family AT4G25470 63.542 7.69e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele46g0238 AP2 1.5e-14 CL0081