Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0220 ATGAACCCGTTGCATCCAGTTGGCGATGAAGATTTGTTCTTCCAGATTTCATTTCCGAATCGTTCTCCTCTCTCAATCCCAACAATCCCAGAACATGAGATTTTTCATGATCCTGCAGAAGAAGTAGTGAAGGATTACGAAAGCTTTCCACCTAATTTTGGAAGTGAAGGAGTAATTATACCAAAGGGTAAGGGAAAGCAGAAGCAAAAGGAATTTCCTGCTAAAATTGCTGAAGATTCCAACAAGAAATGGATGCATAGAGAAACAGAAAGACAAAGGAGACTAGAAATGGCCACGCTTTGTGCCTCCCTCAGATCGGCTTTGCCTCTCGAATACATCAGGGGAAAGCGATCGGCATCAGATCACATTGATGGGGCTGTGAAATATATCAAACAGCTAAAGAACAAGGTCAAGCAATTGAAGACAAAGAGAGATGAATTGATGAAAAATGAACATGGAATCTCTGTTATTGTTCATCCTTACAAGGGTGGAGTTGAGATTATGTGCAGTTATAGCTTCAGAGACTACGTTTTTACTCAGTCAACACTCTTGAGTATTTTGATTAAACAAGGGCTTAATGTGGTGAGCTGCACTACTATCAAAAGGGATGAGATGTTCATTCACACAATTCGATTATTAGAGTCTGATATATCTGAGAGTACTACTGATTACACTGAACTGCAAAGAAAGGTTACTGCAGCAATATTGTCTACAGAACAAAGAGAGACTGCATCTGAACCACAGAACTGCTTATTATGTTGTTGCGAAGAAAGTCACTGA 780 0.3974 MNPLHPVGDEDLFFQISFPNRSPLSIPTIPEHEIFHDPAEEVVKDYESFPPNFGSEGVIIPKGKGKQKQKEFPAKIAEDSNKKWMHRETERQRRLEMATLCASLRSALPLEYIRGKRSASDHIDGAVKYIKQLKNKVKQLKTKRDELMKNEHGISVIVHPYKGGVEIMCSYSFRDYVFTQSTLLSILIKQGLNVVSCTTIKRDEMFIHTIRLLESDISESTTDYTELQRKVTAAILSTEQRETASEPQNCLLCCCEESH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0220 259 Gene3D - 73 159 IPR036638 GO:0046983
Lele46g0220 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 160 IPR036638 GO:0046983
Lele46g0220 259 Pfam Helix-loop-helix DNA-binding domain 83 134 IPR011598 GO:0046983
Lele46g0220 259 Coils Coil 123 150 - -
Lele46g0220 259 CDD bHLH_AtORG2_like 82 149 - -
Lele46g0220 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 81 133 IPR011598 GO:0046983
Lele46g0220 259 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 73 230 IPR015660 -
Lele46g0220 259 Coils Coil 210 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0220 Lele-ChrLele46 1388961 1390035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0220 82 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 41.060 3.13e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele46g0220 HLH 1.6e-07 No_clan