Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0219 ATGTTTCCCAAGAACAAACAGACAAAGAGTCGGCGGCAGAACCCAGATGGTCTGCAAGAAGATTACGATGATGTTCAAAAGAAGCTGATCCGAAGGTACACAGAAAGACAAAGGAGGCAAGAAATGGCCGATCTCTCTGCTTCTCTTAGATCCTTACTCCCTCTCGAGTACATCAAGGGAAAGCGATCGGGATCAGATCACTTAAATGAGGCTGCCAAATACATCAAACATCTACAAAATAGGATCCAGGAACTGAGTGGTAAGAGGAACAGATTAAGGATGATGTGCAATAATTTGAATGTTGAAGACCCTGAGATTACAACCTTAACCAAAGCTACAACAACTCATGACCCACCGACAAATGTTATTACTGTTTCTGGTGTAATTGGGATCGAACCATCTGCATTACAAAGAAAACTAACAGATTCAATTCCTTCTTCAAGGAAGAAGCATATTGCACTGCCTTCTTCTTCCGACAATAATTATGGTGATCAGGCAAGTGTTTGTGATGATGAGAAGAAGATCGTTCGTAGGGAAACTGAAAGGAAAAGAAGGCTGCAAATGACCTCCCTTTGTGAATCTCTCCGATCTTTGCTACCTTTTGAGCTCATCAAGGGAAAGCTTTCAGTGTCTGATCACATAGGGGAGGCTGCAAGTTATATCAAAGATTTGCAGGAGAAAACCCAAGAACTCCAAATTAAGAGAGATAAGCTCAAACAAAAGGCTAATCCAAGTTTCCTTGGTGCTGGAATAGATGAAAGTTCTTCAAGCCATTCAAATATGGTTAAGTGTGTGAGCATTTCGCCTTTTCCTGGTGGCCTAGAAATTTCTGTAGACAGTGGCTTGGAGGAAAGTAGCTTTCCATTATCACTCTTGCTGGAAATATTGACGCAAGAAGGATGTAATGTTGCGAGCTGTGTGTCCACCCAAGTGAATGGGAGGCTATACCACTCTATTAAGTCTGAGGTGGATAACTTGGAAAGCCTTGATATAGCTGGGTTGGAACAGAAACTCAATGCTGCAATCTTCTGGTCAAGGTTTAACTTGGAGTGA 1053 0.4198 MFPKNKQTKSRRQNPDGLQEDYDDVQKKLIRRYTERQRRQEMADLSASLRSLLPLEYIKGKRSGSDHLNEAAKYIKHLQNRIQELSGKRNRLRMMCNNLNVEDPEITTLTKATTTHDPPTNVITVSGVIGIEPSALQRKLTDSIPSSRKKHIALPSSSDNNYGDQASVCDDEKKIVRRETERKRRLQMTSLCESLRSLLPFELIKGKLSVSDHIGEAASYIKDLQEKTQELQIKRDKLKQKANPSFLGAGIDESSSSHSNMVKCVSISPFPGGLEISVDSGLEESSFPLSLLLEILTQEGCNVASCVSTQVNGRLYHSIKSEVDNLESLDIAGLEQKLNAAIFWSRFNLE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0219 350 SMART finulus 32 84 IPR011598 GO:0046983
Lele46g0219 350 SMART finulus 178 230 IPR011598 GO:0046983
Lele46g0219 350 CDD bHLH_AtORG2_like 27 93 - -
Lele46g0219 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 99 IPR036638 GO:0046983
Lele46g0219 350 CDD bHLH_AtORG2_like 173 240 - -
Lele46g0219 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 26 78 IPR011598 GO:0046983
Lele46g0219 350 MobiDBLite consensus disorder prediction 1 24 - -
Lele46g0219 350 Pfam Helix-loop-helix DNA-binding domain 174 225 IPR011598 GO:0046983
Lele46g0219 350 Pfam Helix-loop-helix DNA-binding domain 33 79 IPR011598 GO:0046983
Lele46g0219 350 Coils Coil 221 241 - -
Lele46g0219 350 Gene3D - 19 109 IPR036638 GO:0046983
Lele46g0219 350 Gene3D - 165 245 IPR036638 GO:0046983
Lele46g0219 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 244 IPR036638 GO:0046983
Lele46g0219 350 MobiDBLite consensus disorder prediction 9 24 - -
Lele46g0219 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 224 IPR011598 GO:0046983
Lele46g0219 350 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 13 128 IPR015660 -
Lele46g0219 350 Coils Coil 68 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0219 Lele-ChrLele46 1378969 1383389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0219 32 92 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 60.656 1.34e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele46g0219 HLH 1e-07 No_clan