Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0218 ATGTTTCCTTCACAACGAGGCAATGAGATGGTCATCGAATTTTCTAGCCGTCCCCACCACCACCATCATCAACAACAACACAAGATCTCAGAGGATCTCATTCTGGACGGCGGCCATGCTCATGCTTCTCTGGATATCATCAATTTTTCCGATAAACAATTACAAGGCAGTTCCAAAAACAAGCCGAAGAAGCTACTTTATGAGTCTTCTCATGATAAGATTAACCATTATCGGAATTCTGATAACGAGTACAAGAAGAAAGAGAAGCTCATTCACAGGGAGATTGAGAGACAAAGAAGGCAAGAAATGGCTACCCTCTATGCATCCCTTAGATCTCTTCTTCCACTCGAGTTCATCAAGGGGAAGCGTTCGATATCAGATCACATGAATGAGGCGAAGAACTACATAAAGCACCTGCAAAAGAAAATCAAAGAACTGAGCGCCAAGAGAGATGAACTGAAGAAACTATCAGAGAATTCTTGGAATCCAGAAACACACGAGTGCGAAAAGTACACATATAGCGGCTTTTTCAGTGTTCACGAGATTAATAACAATGGTGGTGTCGGAATAGAAGTTTCTAGTTCCTTGGGAGAGGAAAGCTTTCCCCTTTCAAAATTGCTTAAACTGATGCTCGACGAAGGACTTGGAGTTGTTAATTCGGTTACCAGCCAAGTCAATGCAAGATTAATTCACAGTGTTCAGTGTGAGGTTATTAACAGTTCCGACCTTGTGGACATACCAGTGCTGAGAAGGAAAATTGTCAATCTAGTCCCATCGTTTACATGTTCTGATTAA 795 0.4164 MFPSQRGNEMVIEFSSRPHHHHHQQQHKISEDLILDGGHAHASLDIINFSDKQLQGSSKNKPKKLLYESSHDKINHYRNSDNEYKKKEKLIHREIERQRRQEMATLYASLRSLLPLEFIKGKRSISDHMNEAKNYIKHLQKKIKELSAKRDELKKLSENSWNPETHECEKYTYSGFFSVHEINNNGGVGIEVSSSLGEESFPLSKLLKLMLDEGLGVVNSVTSQVNARLIHSVQCEVINSSDLVDIPVLRRKIVNLVPSFTCSD 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0218 264 Gene3D - 77 169 IPR036638 GO:0046983
Lele46g0218 264 SMART finulus 93 145 IPR011598 GO:0046983
Lele46g0218 264 Coils Coil 129 159 - -
Lele46g0218 264 CDD bHLH_AtORG2_like 88 158 - -
Lele46g0218 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 139 IPR011598 GO:0046983
Lele46g0218 264 FunFam Transcription factor bHLH126 78 167 - -
Lele46g0218 264 Pfam Helix-loop-helix DNA-binding domain 91 140 IPR011598 GO:0046983
Lele46g0218 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 154 IPR036638 GO:0046983
Lele46g0218 264 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 72 257 IPR015660 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0218 Lele-ChrLele46 1371239 1372380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0218 88 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 45.714 3.06e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele46g0218 HLH 2.2e-09 No_clan