Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0217 ATGCCATTCCGGCCGCCCTCTGAGGTGGTTGCCGTCGACCCATATCCACCGTGTTCCCTCTTCTTTCTCGCTTTCCTCTGTTTTCGCAGACGCAGCAGAAAGCGCACCACCCCTTCTTCTTCTGATTCCGAGTCAAAGCCCCCTCTTCGCTTCTCCTACTCCTCCCTCCGCCTCGCCACCACATCCTTTTCGACCCGAATAGGACATGGAGGGTTCGGACCTGTCTTCTCCGGCGTTCTGCCTTCGACCCGAAGGCCCGTCGCCGTCAAGCTCATGGACTCTGCCTCTCTCCAAGGCGAGCGAGAGTTTCACAACGAGCTTTTCTTCGCTTCCAAGCTTTGTTCCCAACATGTCGTGGTTGCGATAGGCTCCGCCTTCGATAGGAATCGCCGAAGATTCTTGCTGGTGTACGATCTAATGCTCAACGGAAATCTTCAGGATGCTCTGTTGCGACGGAAGAGCCCTGAGCTTATGAATTGGAAGAAACGTTTCGCCATAATTATTGATATAGCTAAAGGAATCCGTTACCTTCATTCTTGCGACCCACCTGTGATCCACGGAGACATCAAGCCGAGTAATATTCTACTGGACGCTTCTTTCTCAGCAAAAATTGCCGATTTCGGGCTCGCTCGGTTGAAATCCAAATCCCAGTACGATTTTGATATCTTCGGCGGAATCGATTATTCTGGGTCAGTTGTGCAGGAAACAGAGAGCGTAAATACTGGTTTTGAGGAGCAAACAGTGTCCATGTCAGAAACATCGCCGAAGACAGACTTCCCGGCCAAGGAAAACTGCGACAGGGGTAAGAAGAACGTTGAGAGGTTGAAGAGCAGATCAATGAAGGATTGGTGGAGGAAGGAAGACGATGACAATAAGAAAAAGAGCAAGAAGCAATTCGAATGGTGGAGAGAGGAGTACCTTGAGAAGCTGGAAAAGAAGGACAAGAAAAAGGGATTCTACAGTGATGAAGAAGCATTTGACAGAGAGAGAACGAAAAGCAAAAGAAGAGGAAGGAGTATCGATTGGTGGTTCGACGGAATTAGCAGGATCAGCCATGATTCTTTCAGCGGAGAAATTCACATTCCCAAGAGCGGTGGAATCAGCAGTACTCCAAGTTTGAAAGGAACAGTTTGTTACGTAGCTCCAGAGTACAGCCATGGCGGAGAAATAACGGAGAAATGCGATATGTACAGTTTCGGGGTCCTTTTGCTTGTGATTGTTTCAGGAAGACGGCCGATTGAGGTGCTGAGTGGTTCGCCACTGTCAGAGCTTCAGAGAGGGAATCTATTGTACTGGGCACGCCATTGCGCGCGAAACGGGAAGCTTGTAGAACTGGTGGATCAGAGTGTGTGTATGAAGTCGCCTGAGAAAGAGGAGGCTCTGATCTGCATAAAAGTGGCTCTGCTCTGTCTGGTGAAGTCGCCGTCTCGTCGTCCTTCAATGGAAGAGGTCGTGAGAATGCTCTCCGGACAGATGGAGCCACCGCAATTGCCAACTGAGTATTCGTCTTCATCACCATCTCTGTTTCCCTTCAAGCCTGGGAAGAACGCAGAGAGAAATTCTTGTACGGAACGATTTTAA 1581 0.4953 MPFRPPSEVVAVDPYPPCSLFFLAFLCFRRRSRKRTTPSSSDSESKPPLRFSYSSLRLATTSFSTRIGHGGFGPVFSGVLPSTRRPVAVKLMDSASLQGEREFHNELFFASKLCSQHVVVAIGSAFDRNRRRFLLVYDLMLNGNLQDALLRRKSPELMNWKKRFAIIIDIAKGIRYLHSCDPPVIHGDIKPSNILLDASFSAKIADFGLARLKSKSQYDFDIFGGIDYSGSVVQETESVNTGFEEQTVSMSETSPKTDFPAKENCDRGKKNVERLKSRSMKDWWRKEDDDNKKKSKKQFEWWREEYLEKLEKKDKKKGFYSDEEAFDRERTKSKRRGRSIDWWFDGISRISHDSFSGEIHIPKSGGISSTPSLKGTVCYVAPEYSHGGEITEKCDMYSFGVLLLVIVSGRRPIEVLSGSPLSELQRGNLLYWARHCARNGKLVELVDQSVCMKSPEKEEALICIKVALLCLVKSPSRRPSMEEVVRMLSGQMEPPQLPTEYSSSSPSLFPFKPGKNAERNSCTERF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0217 526 MobiDBLite consensus disorder prediction 244 258 - -
Lele46g0217 526 MobiDBLite consensus disorder prediction 244 271 - -
Lele46g0217 526 MobiDBLite consensus disorder prediction 494 526 - -
Lele46g0217 526 FunFam Os07g0541700 protein 140 221 - -
Lele46g0217 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Lele46g0217 526 Gene3D Transferase(Phosphotransferase) domain 1 345 499 - -
Lele46g0217 526 Pfam Protein tyrosine and serine/threonine kinase 371 488 IPR001245 GO:0004672|GO:0006468
Lele46g0217 526 Pfam Protein tyrosine and serine/threonine kinase 63 218 IPR001245 GO:0004672|GO:0006468
Lele46g0217 526 Gene3D Transferase(Phosphotransferase) domain 1 51 241 - -
Lele46g0217 526 SUPERFAMILY Protein kinase-like (PK-like) 44 503 IPR011009 -
Lele46g0217 526 SMART serkin_6 61 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0217 526 MobiDBLite consensus disorder prediction 495 510 - -
Lele46g0217 526 ProSiteProfiles Protein kinase domain profile. 61 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0217 526 PANTHER OS07G0586332 PROTEIN 21 289 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0217 Lele-ChrLele46 1365872 1367452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0217 370 500 Receptor kinase-like Gene Family AT4G04490 31.343 3.62e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele46g0217 PK_Tyr_Ser-Thr 7.4e-26 CL0016