Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0205 ATGTTTGTCTTCAAAGTCGTCTCTGTTTCTTTTGGTGGGCGGAGAAGGAGCAACGCCATTTCCCGTGCTTCTCTCTTAATTGTCTCATCTCCATTTTTATTTTATTTGTGCCAAAAACTCTTTCCGATTGATTCTCTCCAATCCCAGACCATGGAGGCTCCCACTCTCACCGGCTTGCTCAATCGAGTCTCCGCTGAATTCCCCTCCCGTCGTGCCATCTCCGTCTCCGGCAAGTTCGATCTCACCTATTCTCGTCTTATCGAACTCATCGAACGCGCCGCTTCTCGTTTAGTCTCCTCTGGAATCAACGCCGGCGATGTCGTCTGTCTTACCTTCCCCAATACCGTCGAGTTCATCATAATGTTTTTGGCCTTGATTCGTGCACGAGCCACGGCTGCGCCGCTGAACCCCGCCTATACGGCCGAGGAGTTCGAGTTTTACTTATCCGACTCGGAGTCGAAGCTCTTACTGACGTCCCAAGAAGGAAATGCTCGGGCTCAAGCAGCGGCTTCGAAGCTTAATATCCCTCACGCGACGGCTTCGCTTTCCAAAGCCGATGACGCCGAGCTTAGTCTCTCCCTGGCTCAGAACGAGTCAAGATCGGACTCGGCCGCCAAACTCGTTAACGACCCTTCCGACGTATCCCTATTCCTCCACACCTCTGGCACGACAAGCCGGCCCAAAGGAGTGCCTCTAACTCAGCACAACTTAGCCGCTTCGGTTCAGAATATAAAGTCCGTGTACAGACTCACTGACTCCGATTCGACGGTGATGGTTCTACCACTCTTTCACGTCCACGGACTGATTGCGGGATTACTGAGTTCACTCATTTCCGGGGCGGCTGTGACGCTGCCGGCGGCTGGCCGTTTCTCGGCTTCCACGTTTTGGGCAGACATGCTGAATTATAACGCGACGTGGTACACGGCCGTCCCTACCATACACCAGATCATACTGGATCGTCACTCGAGTAAACCCGAACCCCACCCGAAACTCCGGTTTATTCGTAGTTGCAGCGCGTCGCTCGCACCGATTATGTTGGATCGGCTGGAGGAGGCATTCGGAGCTCCGGTTTTGGAGGCCTATGCAATGACGGAAGCGTCCCATCTAATGTCATCAAACCCGTTGCCGGAGGACGGGCCACACAAGCCCAGGTCGGTGGGGAAGCCAGTGGGTCAAGAAATGGCGATACTGAACGAGAAGGGAGAGATCCAGAACGCTGAAGTTGACGGAGAGGTATGTATCAGGGGCCCGAATGTGACAAAAGGATACAAAAATAACCCTGAAGCTAATACGACAGCGTTCCAATTCGGATGGTTCCATACCGGGGACCTCGGGTTCTTGGATTCAGACGGGCATTTGCATCTGGTTGGACGAATGAAGGAGCTCATTAATCGTGGAGGGGAGAAAATATCGCCCATAGAAGTGGATGCTGTCCTGTTATCTCATCCGGACATTGCTCAGGCGGTTGCTTTTGGAGTCCCAGACGACAAATATGGCGAAGAAATAAATTGTGCAGTGATAGCAAGAGAAGGATCAGAAATTGACGAGGAAGAGGTGTTGAAGTTTTGCAAGAAGAATCTTGCATCCTTCAAAGTCCCCAAGAAGGTTTTCATTACCGATTCTTTGCCAAAAACTGCCACCGGCAAGATCCTCCGTCGTCTTGTTGCTGAACACTTCGTTTCTCAGAAGTGA 1692 0.5189 MFVFKVVSVSFGGRRRSNAISRASLLIVSSPFLFYLCQKLFPIDSLQSQTMEAPTLTGLLNRVSAEFPSRRAISVSGKFDLTYSRLIELIERAASRLVSSGINAGDVVCLTFPNTVEFIIMFLALIRARATAAPLNPAYTAEEFEFYLSDSESKLLLTSQEGNARAQAAASKLNIPHATASLSKADDAELSLSLAQNESRSDSAAKLVNDPSDVSLFLHTSGTTSRPKGVPLTQHNLAASVQNIKSVYRLTDSDSTVMVLPLFHVHGLIAGLLSSLISGAAVTLPAAGRFSASTFWADMLNYNATWYTAVPTIHQIILDRHSSKPEPHPKLRFIRSCSASLAPIMLDRLEEAFGAPVLEAYAMTEASHLMSSNPLPEDGPHKPRSVGKPVGQEMAILNEKGEIQNAEVDGEVCIRGPNVTKGYKNNPEANTTAFQFGWFHTGDLGFLDSDGHLHLVGRMKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAVIAREGSEIDEEEVLKFCKKNLASFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0205 563 FunFam 4-coumarate--CoA ligase 2 461 562 - -
Lele46g0205 563 CDD FACL_fum10p_like 68 557 IPR045310 GO:0016874
Lele46g0205 563 Pfam AMP-binding enzyme C-terminal domain 474 549 IPR025110 -
Lele46g0205 563 Gene3D - 459 561 IPR045851 -
Lele46g0205 563 SUPERFAMILY Acetyl-CoA synthetase-like 52 560 - -
Lele46g0205 563 Pfam AMP-binding enzyme 62 465 IPR000873 -
Lele46g0205 563 Gene3D - 47 458 IPR042099 -
Lele46g0205 563 PANTHER ACYL-COA SYNTHETASE 53 561 - -
Lele46g0205 563 ProSitePatterns Putative AMP-binding domain signature. 217 228 IPR020845 -
Lele46g0205 563 FunFam Peroxisomal-coenzyme A synthetase 55 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0205 Lele-ChrLele46 1279685 1284694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0205 55 562 Monolignol Biosynthesis Gene Families AT4G05160 31.120 1.63e-61 210
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0186 45 1563257 1566272 Lele46g0205 46 1279685 1284694 ECH
Lele46g0205 46 1279685 1284694 Lele46g0205 46 1279685 1284694 ECH
Lele46g0205 46 1279685 1284694 Lele48g1257 48 16945861 16949177 hybridization