Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0196 ATGGCTCCTAAGCAGCCAAGTACGGGCCTTTTCGTTGGGTTGAACAAGGGCCATGTGGTGACCAAGAAGGAATTGGCTCCACGCCCATCAAACCGCAAGGGAAAAACAAGCAAGCGTGTCCATTTCGTGAGGTCATTGATACGAGAGGTTGCAGGATTTGCTCCATATGAGAAGCGTATAACTGAGCTTCTCAAGGTTGGTAAAGATAAAAGAGCTTTGAAGGTGGCCAAGAGAAGGTTAGGCACTCACAAGAGGGCTAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCAGGAAGATGAGGGCTGGTGGAGGTGGAGAGAAGAAGAAGGCGTAA 336 0.4911 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSNRKGKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRRLGTHKRAKKKREEMSNVLRKMRAGGGGEKKKA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0196 111 FunFam 60S ribosomal protein L36 1 106 - -
Lele46g0196 111 MobiDBLite consensus disorder prediction 80 111 - -
Lele46g0196 111 MobiDBLite consensus disorder prediction 1 37 - -
Lele46g0196 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele46g0196 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele46g0196 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 107 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele46g0196 111 MobiDBLite consensus disorder prediction 87 111 - -
Lele46g0196 111 Gene3D 60S ribosomal protein L36 1 106 IPR038097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0196 Lele-ChrLele46 1184664 1185696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0196 1 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 81.250 4.34e-58 173