Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0195 ATGGCGTCCCTCGTCACTGTGTTCTTACTTTCGCTCTTTGCCTGCTATCTTGGAAGCTATTCTGTGGAAAGCCGGAAGGAATTAAGGAATAAGGAATTGAGCCAGAAAACTTCCTTACAATTGGACCACTCAATTTATCCCTACCGAATTGACCCAACACATGTTCACCAACTCTCTTGGCGACCAAGGGTCTTTCTCTACAAAGCTTTTTTGTCAGATAAGGAGTGTGACTATCTTATTTCTTTGGCACAAACTGTGAAAGAAAAATCCTCAGAGAAGGATCATCATTTAGAGGGAGATGCGACAAACAAGAAGCTTACCTCAGAAACTTTATTGACTATGGAATATGATATTGTTGCAAGGATTGAAGAAAGAATTTCACTCTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCAATGCAGGTCATGCATTATGGGCTCGAAAAGGCCGGAAAAAACTTCAACTTTTTTAACAAATCCGACTTGGAATTGAGTGGATCCTTGATGGGTACAGTAGTTTTATTTCTCTCAAATGTCACTCAAGGGGGCCAAATTCTCTTCCCTGAGTCAGAGCCCAAGAGTTCAAGCTGGTATGACTGTAGTAAAAGTGATAATAATCTCAAACCAATCAAAGGGAATGCAATTCTGTTTTTCTCTCTTGACCTTAGTGCATCTCCTGACAAAAGTAGCTCGCATGCTAGATGCCCTGTTCTTGAGGGTGAAATGTGGTCTGCAATTAAATCCTTCTATGCAAGACCGACTGGTGAGGAAATGATCTCATCCTCATTATATGGTGGGGATGAGTGTACGGATGATGATGATCATTGTCCCACCTGGGCCGCCATGGGAGAATGTCAAAGAAATCCTGTATTCATGATTGGCTCTTCTGATTACTATGGTACATGCAGAAAAAGCTGCAATGCATGTTGA 930 0.4172 MASLVTVFLLSLFACYLGSYSVESRKELRNKELSQKTSLQLDHSIYPYRIDPTHVHQLSWRPRVFLYKAFLSDKECDYLISLAQTVKEKSSEKDHHLEGDATNKKLTSETLLTMEYDIVARIEERISLWTFLPKENSKPMQVMHYGLEKAGKNFNFFNKSDLELSGSLMGTVVLFLSNVTQGGQILFPESEPKSSSWYDCSKSDNNLKPIKGNAILFFSLDLSASPDKSSSHARCPVLEGEMWSAIKSFYARPTGEEMISSSLYGGDECTDDDDHCPTWAAMGECQRNPVFMIGSSDYYGTCRKSCNAC 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0195 309 SMART ShkT_1 268 309 IPR003582 -
Lele46g0195 309 ProSiteProfiles ShKT domain profile. 269 309 IPR003582 -
Lele46g0195 309 Gene3D q2cbj1_9rhob like domain 54 248 - -
Lele46g0195 309 FunFam Probable prolyl 4-hydroxylase 12 54 250 - -
Lele46g0195 309 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 36 247 IPR045054 -
Lele46g0195 309 SMART p4hc 62 250 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0195 Lele-ChrLele46 1179257 1182291 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0195 46 1179257 1182291 Lele46g0195 46 1179257 1182291 ECH
Lele46g0195 46 1179257 1182291 Lele48g1268 48 17047265 17051706 hybridization