Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0193 ATGGATTCGAGTCATGTGAAGCAATTCGATCCCTCCAAGGCTGACAGCGCAGGACCGAATCCAGGTCGAAAGGTTCGGGTCGTGGCCAAGGTCAGGGGCTTTGCGTTTCCGGAGGTCGAGGCTCAGAGTGGGTCTTCGAGACCGGTAAACTGGATTTCGGTGAACAAGCCTCCCGGAGAGAGTTCAGAGCGAGTCGCAATCTCCTTCAAGGACCATTCTTCCAGTCGTAAAGATTCTTACTGGGTGGACTATTGTTATGGGGACAAGGAAGAAAATGAAATGATCTATTCAAGAGACGTGAAGCCTCTTATATCTGCAGTTTTTGAAGGTCATAACAGCTCTATTATTGCGTATGGAGCAAGAGGCAGTGGAAAGACTCACGTGATTCAGGGTTCTGCTAAGATACCTGGTTTGTCAGTGCTTGCTGTGGCTGAGTTTCTTTCACTGGCTGAACAGAATCGCAAATCTATTGCTATATCAATGTATGAGGTTGATTATCAGGAGCATGCTGTTGATTTATTAAATCCAGAACAACCAGCCATTTTAGTTCTTGAAGACCGAGGCCATATTCAGTTTAAAGGGCTCTCTCAGATTCGTGTGAAATCCATTTCAGAGTTTCAGAAAGCATACTTCACTGCTTGTGCTCCTCGAAAAGCAGCCATGAAAAAGGGGAATGACCATGCTCGTAGGACCCATGTGGGATTAATAGTTCATGTCTTTTCTGAAGCTAAAGGCACAGAAACTGGCTCTGTGGGCAAAATGAATTTTGTTGACTCGGCAGGTTATGAAGATGCCAGGAAGAAGAGTTGTGACAGCTCTTGTCTAGCTGAAACCAATAAAATTAATAAGTCCATATATGCTTTATTAAATGTCTGTCACGCTTTGAGCACCAATGAAAGTCGTGTCCCCTATCGCGAGAGCAAACTTACCCGCATGTTACAGGACTCTTTGAGAGGGACTAGCCGAATTTTGATGGTTGTCTGCATGAACCCATCTTTTTGCCAAGACACTATCTACATGTTAAGCTTAGTATCCCGGTCACGTCAAGTGATTCATCGAGTGACTGTAGACGCCACAAAGAAAAGTGAAAGCTGTTCTGCAAGGCAGATGATACGTACATCTCATAAGAGTAACCTGCCCAAGACTGTATCTTCTACGGCAAAAAAATTAACTAGCTCTCGATCACATATACGTGAAAAGAAAGTTGATGTGATAAAATCTGCAATAAAAGGAAGGAAATTATTTGATGAAGCAAGTCATTCTGCTAAAGCTGAGAAGGTATCTCTTACTCTCCTTTCCCCTCTAAGGGAAAAATCCATTGTGCCTGTTACCGAAGAATTATTGCCTTCATCAATGGATGACTCAGTTTCAGATGCTAGGCATCAAGTAGAACTCATAATAGAAAATGATGACTCAGTCTTAGATGCTAGGTATGAAGCAGAACTCATGGTGGAAAAGGCTGTCCTTGAGAAAATTGTGGATCATCGAGAGGAGCATACTCCTAATTCTGTCAAGTATAAGAAAGCATTGTCCACAGACTCTATAGTACAAGAAGGTCATTATATGGATAAGGAGAACGACAGTTTCATTGCTAATAAAGATCAATCACCACCAATTAGTGCTCAACTACGTGAACTATCAAACAATTTGAAGCTTCTCTTATCAACACCAATAAGCGTGAAATTACCCGAACAGGACTGCATTATATCACTTGACAATCAGGTGTCTTCTACAGATATTGTGGAACCAAAAACTCCTGTCACAGAACAAACTATGGGTGCTATTGATAGATGGAATGTCATGAATGCCAAAAGTCCTTGGGAAACTTACAGTGCGCGCAGTTCAGGAATGAAGGGGATTGGTGAGAAAAGAGCAACCTACATACTTGAGCTTCGTGATGAATCTCCTGAACCTTTCAAGAGTCTTGATGATTTACAGGACATTGGACTTTCAGCAAAGCAGGTGTCTTTCTTCTCTTGA 1980 0.4237 MDSSHVKQFDPSKADSAGPNPGRKVRVVAKVRGFAFPEVEAQSGSSRPVNWISVNKPPGESSERVAISFKDHSSSRKDSYWVDYCYGDKEENEMIYSRDVKPLISAVFEGHNSSIIAYGARGSGKTHVIQGSAKIPGLSVLAVAEFLSLAEQNRKSIAISMYEVDYQEHAVDLLNPEQPAILVLEDRGHIQFKGLSQIRVKSISEFQKAYFTACAPRKAAMKKGNDHARRTHVGLIVHVFSEAKGTETGSVGKMNFVDSAGYEDARKKSCDSSCLAETNKINKSIYALLNVCHALSTNESRVPYRESKLTRMLQDSLRGTSRILMVVCMNPSFCQDTIYMLSLVSRSRQVIHRVTVDATKKSESCSARQMIRTSHKSNLPKTVSSTAKKLTSSRSHIREKKVDVIKSAIKGRKLFDEASHSAKAEKVSLTLLSPLREKSIVPVTEELLPSSMDDSVSDARHQVELIIENDDSVLDARYEAELMVEKAVLEKIVDHREEHTPNSVKYKKALSTDSIVQEGHYMDKENDSFIANKDQSPPISAQLRELSNNLKLLLSTPISVKLPEQDCIISLDNQVSSTDIVEPKTPVTEQTMGAIDRWNVMNAKSPWETYSARSSGMKGIGEKRATYILELRDESPEPFKSLDDLQDIGLSAKQVSFFS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0193 659 PANTHER KINESIN-RELATED 71 482 IPR027640 GO:0003777|GO:0007018
Lele46g0193 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 358 IPR027417 -
Lele46g0193 659 SMART kinesin_4 22 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele46g0193 659 MobiDBLite consensus disorder prediction 1 23 - -
Lele46g0193 659 ProSiteProfiles Kinesin motor domain profile. 24 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele46g0193 659 Gene3D Kinesin motor domain 22 379 IPR036961 -
Lele46g0193 659 PRINTS Kinesin heavy chain signature 253 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele46g0193 659 PRINTS Kinesin heavy chain signature 302 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele46g0193 659 PRINTS Kinesin heavy chain signature 222 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele46g0193 659 PRINTS Kinesin heavy chain signature 110 131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele46g0193 659 Pfam Kinesin motor domain 60 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0193 Lele-ChrLele46 1168290 1174111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0193 78 372 Calmodulin-binding Proteins AT5G65930 30.599 3.77e-33 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0193 46 1168290 1174111 Lele46g0193 46 1168290 1174111 ECH
Lele46g0193 46 1168290 1174111 Lele48g1269 48 17052913 17059005 hybridization