Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0192 ATGCCTGTTGAAAAACACAGGGGTTTTGGTACTACAGATGTCATGAAAGCAGAGGATGGAAATGACTCCTTAGATACCATAATCAGAAAGGCGATTGTCAGAGAACCTTTTCTTTCTTTTCCAAGGGCTAGTGACAGTCCAGTCCAGTGGATAAAACTACTTCACGCGTTAGATCAGCAAGAACTGCCAGGCTGGCCTTTGCTCTCTCCTCTGAAGGTTCAATTGCAGAAGTGTGAAAAGTGTTCCCGAGAATTCTGCTCTTCAATTAATTACAGAAGACATATACGTGTTCACCATCGGTTGAAAAAGATTGATAAGGTTTCCACGAAAAATAGAGATCTGTTAGGAGCATATTGGGATAAGTTCTTTCTAATTGCTATATTGGATAAAAGCTGTTCTTGTTTTTTTGGAGGCCGTAGCTTCCTTTCAATTGTGAAAGAAGTTCCAGGGTCGTCTATTTTAAAAGCGCTGACGACTCTGGTATGGAAACAAGGATTTTCTTCACTTCCACAGAATTATCTGAAGGCTGGTTCTGCCCTTTTGGATATTGTTCAAGCTAGATCTTCCATTCTTTCTATATCTTCCAAGGAGTTGTTTGGTATCCTTGATAGTGCCAGTGAAAAAACATTTTTATGTGGGGCAGCAGTGTCAATGCAAAAATATATTTTTGATGGAGAACCAGGAAAGATTGGCCTTGAACCAAAAAACCTAGTTGCTTGTACTAGTTTCTTGCTAGAACAGAAAATGGTAAAGGAATGGCTTGCTGACAAGGAAGCTGAAGCATTAAGATGCCAGAAGCTTCTAGTGGAGGAGGAAGAAGCTGCTCAGAAAAGGCAAGCTGAGATTTTGGAGAGGAAACGTCAGAAAAAACTTAGGCAAAAAGAACAAAAGGCAAGGGGGCAGAAGCTGCAGGATGAGGCAGAAATGAAAAAGAATGACAGCAGTAGATCATCTGACAGTTCATTAGTAGAAGCATTTTCAGATACATGTGTTTTTGGAGAACATAGTCCAGATACATTTGCAAGCCATGGTCATTCACTACATGTGCCCTTCCATTGCACAGACACTAATGAAGGTGTGGATGGGGGTTCTCTGTCAATGTATGATTGTGGAACTGATAAGAACATTGAGCAGGAGGCATCCCAAGGACATGTTTGTCAACAAGTGGTTTCTCAACCAAAATCACAATGGGCTTTAGCTAATGGTTTTCATGTAAATAATAACTCTCAAATTTCCAAGCTTGGAGTTATTCAAAAATATGGGAGCCACTGCGATCAAAAGGCTGCTCCCATGTTTAATGGTAACAAAGTATGGAGCCGAAAGCCTGGGCAAAAAATTATTGGGGTACATTCAAAAGCCAGACTAGAGAAAGAACCAGATGAGGGTAAAAACCATGAAGTTTTAATAGGGTCTATATCTGTTACTCTTGGAAATTGCAGCCAGTCAGAGGATAATCTATTGGCATCTAGAAAGGACTCCATGGTAGGGAATTTGACCAAGCATAGTAATGCTCAAGTGAAGCCAGTCAAACCTGATTCTATACAGATCGGTAACAATCGGTTAATAGTTAAGTTTGTTAAGCTTTGGAAGCCAATTACTCATCATGGAACTAAATATTCATTACCACTTCACCGTGCTAGTCCAGAAGCTAATGCAATAGATGGAAAAAAAGATTATCAAAATTTGTCCAACCAAAATTCTTTAAGGCTTTGTGATTTAGATGCTAGTGATAGTAGTTATGGAAATAACTATCTAGAGGGCCAAGTGGGTCCAGGAAACTTGCAGTTTTCCAGTGAAGCTGCTAAAGCTTTTCTTGTAGAAAGATGGAAAAAAGCTATCTCGTCAAACCATGTGAAATTGGTTTTTTCAACTGATTTTGAACCTCCTAGGTGCATGGAGGCACAAGACTGTGAACCAGCTATATGTCAATCTTCGAATTATTGA 1944 0.3971 MPVEKHRGFGTTDVMKAEDGNDSLDTIIRKAIVREPFLSFPRASDSPVQWIKLLHALDQQELPGWPLLSPLKVQLQKCEKCSREFCSSINYRRHIRVHHRLKKIDKVSTKNRDLLGAYWDKFFLIAILDKSCSCFFGGRSFLSIVKEVPGSSILKALTTLVWKQGFSSLPQNYLKAGSALLDIVQARSSILSISSKELFGILDSASEKTFLCGAAVSMQKYIFDGEPGKIGLEPKNLVACTSFLLEQKMVKEWLADKEAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKARGQKLQDEAEMKKNDSSRSSDSSLVEAFSDTCVFGEHSPDTFASHGHSLHVPFHCTDTNEGVDGGSLSMYDCGTDKNIEQEASQGHVCQQVVSQPKSQWALANGFHVNNNSQISKLGVIQKYGSHCDQKAAPMFNGNKVWSRKPGQKIIGVHSKARLEKEPDEGKNHEVLIGSISVTLGNCSQSEDNLLASRKDSMVGNLTKHSNAQVKPVKPDSIQIGNNRLIVKFVKLWKPITHHGTKYSLPLHRASPEANAIDGKKDYQNLSNQNSLRLCDLDASDSSYGNNYLEGQVGPGNLQFSSEAAKAFLVERWKKAISSNHVKLVFSTDFEPPRCMEAQDCEPAICQSSNY 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0192 647 Coils Coil 273 293 - -
Lele46g0192 647 MobiDBLite consensus disorder prediction 297 317 - -
Lele46g0192 647 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Lele46g0192 647 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Lele46g0192 647 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 636 - -
Lele46g0192 647 MobiDBLite consensus disorder prediction 286 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0192 Lele-ChrLele46 1160726 1164924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0192 18 625 C2H2 Transcription Factor Family AT4G25610 41.252 9.83e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele46g0192 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0192 46 1160726 1164924 Lele46g0192 46 1160726 1164924 ECH