Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0181 ATGTCATCGCCGGGATTCACGGGTGGTGGAGCATCGGAGTTCTACGGCGGAGTTGGCCGATCCATGGCGGCAACCGCCATGAACGACCCTGCCAACGCTAACAACCTTCAACCTTCTCTTCATCCTCTGTACCGAAACCAGCAGCAACAACAACAACACCGAGCAATTTTTCTAGATCCTTATACGCAGATCGCAAGGCAAAATCCGAGTCTCATCGGGAAGCGAACCCTCGCAGAATTTCAAACTCATCAACAGAACCACAACAATCAGGTCCTTTCAAGCCTCCTTCTACGCTCTGTGAAGCCCAGAAACTTCCAGAATAGCTCTCCTATGTCTCCGATGTCACCCATGGATTTCTCCATGTCCCCTGAATTGCCAAACCCTTCGGTTTTCTCGTCGCAGCGCTTTGGGTTGCCTTTGCTTCAACAATCTCGCCCACAGACGATGAATCTCCCAAACGCGACCTTATCCAGGGCTGGGTTTCCATATTTGAATGGTAATTTGGTTCAGGAAAGTGAGAAGAAGGTCATGGACCATCGGCTTCAGGAGTTGGAGAAACAGCTTTTGGAAGACAACGACGAGGAAGAAGGCGATGCGGTATCTGTGATCACCGGCAGCGAGTGGTCAATAGAGAACCTTATCAGTCCCGGCGTTCAGAAGCCAATTTCGTCGTCGCCTACTTCGTCTACAACCTCGACAACGTCGTCATCTTCCTCTGTAGCTTCCCCTGCTTCCACCTGTTTGAAGCAGTCGTTAATGGAGGCCGCATCTGCAATTTCCGAAGGGAAATCCGACTCCGCCACGGAGATCCTGACCCGTTTGGGACAGTTATCAAATCCGAACGGCAATTCAGATAAGCGATTGACGAGTTGTATGATTTCCGCACTGAAATCCCGGGTGAACCCACACGAAAACCCACCTCCGGTTGTAGAACTCTTCAGCAGCGACCACGCCGAGTCGACTCAGTTGCTCTACGAACATTCTCCTTGCTTCAAGGTTGGGTTTATGGCGGCCAATCTGGCAATCCTTGAAGCCGCATTCGAGGACTACTCAGAGAACAACGGCAGCAACAAGTTACACGTGGTCGATTTCGACATCGGCAGGGGTAAGCAATACATAAATCTCCTCCACGAGCTCTCGATGCGTCAGAATGGAAAATTAGTCACGGTGTACATCACGGCGGTTGAGGAGAACGGCAGTGAAGAGAGGTTGAAGATTGTGGGTGATATGTTAAGACAACAAGCGGAGCAACTCGGAGTCAGGTTCGAGTTCAGAGCAATAACCCAAAAACTCACCGAGTTAACGCGTGAGTCACTAGGGTGCGGGGACGACGAACCACTCGCGGTGAATTTCGCTTTCAAATTGTACAGAATGCCCGACGAAAGCGTTTCCACAGAGAACCCCCGGGATGAGCTTCTACGGCGCGTGAAAGGGTTGGCCCCGCGCGTGATGACGCTGGTGGAGCAAGAGATAAACACCAATACGGCGCCGCTTACATCCCGCGTTTCCGAGTCGTGCTCATATTACGGCGCGCTATTGGATTCGCTCGAGTCAACAAGCTTCTCAAGATACAACGTAGAGCGAGTGAAGTTGGAACAGGGACTGAGTCGAAAGCTGATGAACTCGATCGCGTGCGAAGGAAGAGATCGCGTGGAAAGGTGCGAAGTGTTTGGGAAGTGGAAGGCGCGTACGACCATGGCGGGGTTTCAACTGAAGGGAATGAATCAGAGAATCGCCGAGTTGATAAAAGCGCGACTCAACCAGGGGAACCGAGTCAACCCGGGATTCACAGTGAAAGAGGAGAATGGTGGGATTTGCTTTGGTTGGAGGGGTCGGACACTCACCGTCGCATCTGCTTGGCGTTAA 1866 0.5182 MSSPGFTGGGASEFYGGVGRSMAATAMNDPANANNLQPSLHPLYRNQQQQQQHRAIFLDPYTQIARQNPSLIGKRTLAEFQTHQQNHNNQVLSSLLLRSVKPRNFQNSSPMSPMSPMDFSMSPELPNPSVFSSQRFGLPLLQQSRPQTMNLPNATLSRAGFPYLNGNLVQESEKKVMDHRLQELEKQLLEDNDEEEGDAVSVITGSEWSIENLISPGVQKPISSSPTSSTTSTTSSSSSVASPASTCLKQSLMEAASAISEGKSDSATEILTRLGQLSNPNGNSDKRLTSCMISALKSRVNPHENPPPVVELFSSDHAESTQLLYEHSPCFKVGFMAANLAILEAAFEDYSENNGSNKLHVVDFDIGRGKQYINLLHELSMRQNGKLVTVYITAVEENGSEERLKIVGDMLRQQAEQLGVRFEFRAITQKLTELTRESLGCGDDEPLAVNFAFKLYRMPDESVSTENPRDELLRRVKGLAPRVMTLVEQEINTNTAPLTSRVSESCSYYGALLDSLESTSFSRYNVERVKLEQGLSRKLMNSIACEGRDRVERCEVFGKWKARTTMAGFQLKGMNQRIAELIKARLNQGNRVNPGFTVKEENGGICFGWRGRTLTVASAWR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0181 621 Coils Coil 174 194 - -
Lele46g0181 621 MobiDBLite consensus disorder prediction 216 243 - -
Lele46g0181 621 Pfam GRAS domain family 248 621 IPR005202 -
Lele46g0181 621 ProSiteProfiles GRAS family profile. 239 621 IPR005202 -
Lele46g0181 621 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 218 614 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0181 Lele-ChrLele46 1084128 1085993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0181 44 621 GRAS Transcription Factor Family AT5G52510 50.240 1.63e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele46g0181 GRAS 5e-100 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0181 46 1084128 1085993 Lele46g0181 46 1084128 1085993 ECH
Lele46g0181 46 1084128 1085993 Lele48g1278 48 17128845 17130695 hybridization