Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0175 ATGAGCTCTTCTTCTTCTTGTTACTTCATAGTCCAAAACTTTCCTTCTATGGCCCCTCAAATGCTTGTTCTACCTTTAATTCTTCTTGCTTTCCTTATTCCCACTTCGTTTTCTTTCACTCCTGTGGATAATTATCTACTCAACTGTGGATCATATGCCAATGCATCACTCTTCAACCGAATCTTCACGGGTGATTCCATGAAACCTGGTTTGGATTTTCTTGTAGCAAGTAAATCTATTGCGCTTGTAAACCAAAATTCAACTCAGGATGCTTCCGCTTTGTATCACACGGCTAGAGTTTTCACGAGCTCGGGGAGCTATAGGTTCCATATGAAGAGTAGAGGTACCCATTTGGTACGTATTCATTTCTCGCCCTTTTTGGCTCAAGGTTTTGATTTAAAATCCGCCAATTTTAGTGTTTTGGGTGGTGGAAAGACGCTTCTAAAAGTGTTTCAGTTGCATAATGGCACATTGATTAAGGAGTATATATTGAAGATAGAATCAAATCTGCTCGAAATAGAGTTTGAACCTGTGGGTGATTCTGGTTTTGGGTTTGTCAATGCTTTGGAGGTATTTACAGCTCCTGTAGACTTCATTCTGGATTATGGAGCTAGGTTAGTGGGCTCTTCTGGAGTTGAAGAGTACAGGAACCTTTCATCTCAGGTTTTAGAGACAATTTATAGAATTAATGCTGGTGGCTCGAAAATAACTCCTTTCAACGACACCCTCTGGAGGACTTGGATTCCTGATGATGATTATTTGGTGTTTAAGGAAGCAGCTAAGCGTGTAGCGAGCACTCATACACCAAATTATCAGAAGGGAGGTGCAAGCCCAGAGATCGCTCCTGATCATGTTTATATGACTGCCCAGGAGATGAATCGGGAAAACTCAAGTCTGGCTTCCAGGTTCAATATAACTTGGAAATTTCAGGTGGCTCCGGAGGGGGGTGGTGTTCAACACTTGGTTCGGTTGCATTTCTGTGATATTGTTACCCCTGCATTGAACTTGCTGTACTTTGATGTGTATCTTAATGGTTACTCTGCATACAAGGATCTTGATCTGTCATCTTTAACTGTCCATGTTCTTGCATCTCCAATCTATGTGGATTTTGTTGTAGATTCTGATGATTCAGGTTTTATTGAAATAAGTGTTGGTCCTTCTGATCTGAACAGTTTGATGAGGATGAATGCATTGTTGAATGGGGCAGAGATCATGAAGATGGTCAATGTTATGGATTCACTTGTGGTCCATAAAAGAAAAATATTATGGGTATTGGTGGGCTCTCTTGTTGGAGGAGTCGTATTACTTTTGGCAGTGGTTGGGCTTCTTGCTTTTATGTGCTGCAAGAGGAAACCTAAACAAAAACCAGCAGAAAGTGTAGGCTGGACCCCGTTACGAATGTTTGGAGGGAGCTCACTTAGCCGATTGTCTGAAGCTCTTGCTTCTCCTGGTTCTCATGGATACTTAGGCTTGAAAGTCCCTTTTATTGATATACAAGCAGCAACAAACAATTTTGATAGAAATCTGATTATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGGGAAACTCAAAGAAAATGTGAAGGTTGCAGTCAAGAGAGGAATGCCGGGGTCCAGACAGGGCCTTCCAGAGTTCCAGACTGAAATAACAGTTCTATCCAAAATTCGCCATCGTCATCTTGTTTCACTTGTTGGTTTTTGTGAGGAAAATTCAGAGATGATACTTGTCTATGAGTATGTTGAAAAGGGCCCACTTAAAAAGCATTTGTATGGTTCAGGACTTCCTTCTCTGTCTTGGAAGCAGCGTCTCGAAATATGCATTGGTGCAGCTAGAGGTCTTCATTATCTTCACACTGGTTTTGCACAAGGAATCATCCACCGTGACATTAAATCAACCAACATATTGCTTGATGAAAATTACGTGGCCAAGGTTGCTGATTTCGGTCTTTCAAGATCTGGTCCATGTCTCAATGAAACCCATGTTAGTACTGGTGTCAAAGGCAGTTTTGGTTATCTGGATCCTGAGTATTTCCGGAGGCAGCAGCTTACAGATAAATCGGATGTTTATTCGTTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGCCAGACCTGCTGTTGATCCACAACTTGCTAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCAGAAGAAGGGCATGCTGGAGCATATTGTGGATCCCCTTATTGCCGGGCAGGTCAAACCTGAATCCTTGAAGAAATTTGGGGAAACAGCCGAGAAATGTTTGGCTGACTATGGTGTTGACAGGCCAACTATGGGTGATGTGTTATGGAATTTGGAATATGTACTTCAAATTCAAGAAAGTGGTCGACTAAGGGAACCAACAGCCAACTTGACAGCAACTGTTGTTACTGGAACTCCTTCTGACAACATAAGAACATATGGATATTATGATAATTGTAATTCAGACATAAGTACTAGCGAAGTTTTCTCCCAACTAATGAACAATGAAGGCAGATAG 2508 0.4167 MSSSSSCYFIVQNFPSMAPQMLVLPLILLAFLIPTSFSFTPVDNYLLNCGSYANASLFNRIFTGDSMKPGLDFLVASKSIALVNQNSTQDASALYHTARVFTSSGSYRFHMKSRGTHLVRIHFSPFLAQGFDLKSANFSVLGGGKTLLKVFQLHNGTLIKEYILKIESNLLEIEFEPVGDSGFGFVNALEVFTAPVDFILDYGARLVGSSGVEEYRNLSSQVLETIYRINAGGSKITPFNDTLWRTWIPDDDYLVFKEAAKRVASTHTPNYQKGGASPEIAPDHVYMTAQEMNRENSSLASRFNITWKFQVAPEGGGVQHLVRLHFCDIVTPALNLLYFDVYLNGYSAYKDLDLSSLTVHVLASPIYVDFVVDSDDSGFIEISVGPSDLNSLMRMNALLNGAEIMKMVNVMDSLVVHKRKILWVLVGSLVGGVVLLLAVVGLLAFMCCKRKPKQKPAESVGWTPLRMFGGSSLSRLSEALASPGSHGYLGLKVPFIDIQAATNNFDRNLIIGSGGFGMVYKGKLKENVKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSGLPSLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLNETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLAREQVNLAEWALEWQKKGMLEHIVDPLIAGQVKPESLKKFGETAEKCLADYGVDRPTMGDVLWNLEYVLQIQESGRLREPTANLTATVVTGTPSDNIRTYGYYDNCNSDISTSEVFSQLMNNEGR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0175 835 SUPERFAMILY Protein kinase-like (PK-like) 490 776 IPR011009 -
Lele46g0175 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Lele46g0175 835 CDD STKc_IRAK 511 776 - -
Lele46g0175 835 Gene3D - 44 197 - -
Lele46g0175 835 Gene3D - 222 409 - -
Lele46g0175 835 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Lele46g0175 835 FunFam receptor-like protein kinase FERONIA 472 580 - -
Lele46g0175 835 Pfam Protein tyrosine and serine/threonine kinase 510 702 IPR001245 GO:0004672|GO:0006468
Lele46g0175 835 SMART serkin_6 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0175 835 FunFam Putative receptor-like protein kinase 44 195 - -
Lele46g0175 835 ProSiteProfiles Protein kinase domain profile. 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0175 835 PANTHER OS07G0166700 PROTEIN 493 782 IPR045272 GO:0004714|GO:0006468
Lele46g0175 835 FunFam Receptor-like protein kinase FERONIA 581 794 - -
Lele46g0175 835 FunFam Receptor-like protein kinase FERONIA 222 409 - -
Lele46g0175 835 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Lele46g0175 835 Pfam Malectin-like domain 47 407 IPR024788 -
Lele46g0175 835 Gene3D Transferase(Phosphotransferase) domain 1 581 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0175 Lele-ChrLele46 1058872 1061379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0175 29 835 Receptor kinase-like Gene Family AT3G46290 49.880 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele46g0175 Malectin_like 6.1e-30 CL0202