Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0170 ATGGCGCTTCCCGGCCTTGGCCCCTTCGCCTCCGTCACTGCCGCCGCCAGTACCACGACTGCCTCCACTGCTAATTCATCGGACGACTCTTCGAAGAAGATCCGGAAACCGTACACTATAACCAAGTCCAGGGAGAGCTGGAGCGAGCCCGAGCACGACAAATTCCTCGAAGCCCTCCAACTTTTTGACCGTGATTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATACAGATACGTAGCCATGCACAGAAATATTTTCTAAAAGTTCAAAAGAGTGGAGCAAATGAACATCTACCTCCACCCAGGCCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCCAAAAATGCTCTGATACACTCTCAAATATCAGGATCCTTTCAATCTTCATCTCCTCTGGTTGAACCTGGATATATAATAAAGCCTGATTCCTCAGCAATGATCAAAACTCCAGTTACTAACGCTGTAGTGTCTTCTTGGTCAAACAACACTTTGCAGGCGACCAATTTACTGCATGGGCCCAGATTGAATAATAGTTGCAGTAGCAGTGAAAGCACTCAGAGAGCACGGTCAATTGGTGTATCTACTGGTCAAGCGAATAATATCCATCCATTGAGAGGCAAGACTTTGATTATTCTGCCAGACTTTGCCCAAGTTTACAAGTTCATTGGCAGTGTATTTGACCCAAAAGCCAGTGGGCATCTGCAGAAACTAAAAAAGATGGATCCTATCGATGTTGAGACGTGGGGGATGAGGCATAAAAGGCTTACTTTGGCTTTGGATGTTTTGTATTTAACTTGTGGAAACAACTACAGCTATATAAATGAGAACTCATGCTTCAGGAACACTGACATCTATCCTTTTGGGCCTATCCAGGTACTACTGTTGATGAGAAACCTGTCTATCAATTTAGCAAGCCCAGATTTTGAGGATCATGTAAGTATTCAGTTCACTGATTTGTTAGAAGGTTGCTCTCTTCTTATGAGGTGGAACCAGGGACAATCTAGCTATCTCAACGCGGAAAGACCCGGATGCAACGAGCAGTGGAAGAGTGTTATGCTTCAATGGAGGATGGGGAAGAGCAACAAGCTGAGAGGTCTGTACAGTTCCAAAGCTCTACAGTTTTTTCTTGGACTAGTACACTACCGGTTCTGTCTGAGTTTTGACTGGACTTCAAATACCTTCCCTGTATGCGAGGCAACTTCTGTAGTAAACTTAAATGTTGTTGAGTAG 1248 0.4407 MALPGLGPFASVTAAASTTTASTANSSDDSSKKIRKPYTITKSRESWSEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASKNALIHSQISGSFQSSSPLVEPGYIIKPDSSAMIKTPVTNAVVSSWSNNTLQATNLLHGPRLNNSCSSSESTQRARSIGVSTGQANNIHPLRGKTLIILPDFAQVYKFIGSVFDPKASGHLQKLKKMDPIDVETWGMRHKRLTLALDVLYLTCGNNYSYINENSCFRNTDIYPFGPIQVLLLMRNLSINLASPDFEDHVSIQFTDLLEGCSLLMRWNQGQSSYLNAERPGCNEQWKSVMLQWRMGKSNKLRGLYSSKALQFFLGLVHYRFCLSFDWTSNTFPVCEATSVVNLNVVE 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0170 415 FunFam protein REVEILLE 6 isoform X1 46 94 - -
Lele46g0170 415 MobiDBLite consensus disorder prediction 29 46 - -
Lele46g0170 415 SMART sant 43 91 IPR001005 -
Lele46g0170 415 MobiDBLite consensus disorder prediction 94 119 - -
Lele46g0170 415 MobiDBLite consensus disorder prediction 14 46 - -
Lele46g0170 415 ProSiteProfiles SANT domain profile. 42 93 IPR017884 -
Lele46g0170 415 MobiDBLite consensus disorder prediction 14 28 - -
Lele46g0170 415 CDD SANT 46 89 IPR001005 -
Lele46g0170 415 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 91 IPR006447 GO:0003677
Lele46g0170 415 Pfam Myb-like DNA-binding domain 44 89 IPR001005 -
Lele46g0170 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Lele46g0170 415 PANTHER SWI/SNF COMPLEX-RELATED 17 310 - -
Lele46g0170 415 Gene3D - 47 94 - -
Lele46g0170 415 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0170 Lele-ChrLele46 1026144 1030857 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele46g0170 Myb_DNA-binding 1.5e-09 CL0123