Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0169 ATGATTATACCAGAGAAGAATCGCAAGGAGATCTGCAAATATCTCTTCAAAGAGGGAGTATGCTATGCGAAGAAGGATTATAATCTTGCAAAGCACCCAGAGATGGATGTGCCAAATCTACAGGTAATAAAGCTGATGCAGAGCTTCAAATCGAGGGAATATGTTCGGGAGACGTTTGCATGGATGCATTATTATTGGTTTCTAACAAACGATGGAATCGAATATTTAAGGACATACCTTAATCTGCCCTCAGAAATTGTGCCTGCCACCTTGAAGAGAACTCCTAAACCAGTTGGCAGGCCATTCGGTGGTGGCCCACCTGGGGATCGCCCACGTGGTCCTCCTCGGTTTGAAGGAGGTTCAAGGTCTGGTGACCGTGATGGATACCGTGGAGGGCCTAGAGGAGGACCTTCTGGTGAATCTGGTGGTGACAAAGGAGTAGCTCCGGCAGATTATCAGCCATCTTTTAGGGGTCCTGGTGCAAGGCCTGGCTTTGGACGGGGCGGTGGAGGTTTTGGCGCTGCACCTGGTACCAGCTTTTTATAG 546 0.489 MIIPEKNRKEICKYLFKEGVCYAKKDYNLAKHPEMDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEYLRTYLNLPSEIVPATLKRTPKPVGRPFGGGPPGDRPRGPPRFEGGSRSGDRDGYRGGPRGGPSGESGGDKGVAPADYQPSFRGPGARPGFGRGGGGFGAAPGTSFL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0169 181 FunFam 40S ribosomal protein S10 1 104 - -
Lele46g0169 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Lele46g0169 181 Gene3D - 1 104 IPR036388 -
Lele46g0169 181 MobiDBLite consensus disorder prediction 115 129 - -
Lele46g0169 181 MobiDBLite consensus disorder prediction 92 181 - -
Lele46g0169 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 176 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0169 Lele-ChrLele46 1023880 1024987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0169 1 157 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 79.245 2.87e-73 216