Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0156 ATGGCTTCGTTTCTTCTCTGCACAATTCTTGTGTTTGCTTTTCTACGAAAGGTTTCTGGCGATGGGGAAGATGAGGTCCTTACTGCATGGAAGAAGAAGATGAACGATCCTAACGATGTTCTTAAGAACTGGGATCCTACCATAGTGAATCCTTGCACCTGGTTTGGTGTTAAATGCAATGGCGAAACTGTCACTCGTATTGATCTTGGAAATGCTAACCTTTCGGGTGAACTAGTTCCAGAGCTTGGTCAGCTCAGAAATTTGCAGCAATTGCGTCTCAATAATAACAACTTATCAGGAAACATTCCTTTGTCTTTGACTGGTCTTAAATTGCTGCAAGTCCTTGATCTCTCGAACAATCAGTTAAGTGGAGAAATACCAGTTGGCGGTTCATTTTCATCATTTTCTCCCACCAGTTTTTTAAATAATCCTGGACTAAGAGCACCAAATGGATCTCCACCACCTCTGACGCCACCATCTCCTTCAGGTAACAGTAATAATACTGCGGCAATTGCAGTTGGAGTTGCTGTTGGCGCTGCCCTGTTATCTGTAACCCTCGCTGTTGTACTTGTATATTGCAGAAGAAGGAAATCAAAAGTAGAACATTTCTTTGATGTTGCTGCTGAGGATCCTCCTGATGAAATTGATCATCACCTTGGTGGTCAGCTTAAGCGGTTTTCTCTGCCTGAGCTACTTGTAGCAACAGATAACTTCAGTAGCAGAAACATTCTGGGTGTAGGTGGTTTTGGTAAGGTTTATGAAGGACGCTTAGCTGATGGTTCTCGTGTAGCAGTAAAGAGACTGAAAGAGGAACGAGCACATGACAAAGACATGCAATTTCAAAGAGAAGTGGAAATGATTAGCATGGCTGTTCATCGAAACTTACTTCGCCTTCTTGGCTTTTGCTCTACCCTCACTGAACGCTTGCTTGTTTATCCTCTCATGGTTAATGGTAGTGTAGCATCATGCTTACGAGCTTTCGACCTAGCTCGACTTGCACTGGAAAATGATCATATCATGTTGCTTGACTGGGTGAGAGAAGTGGTGAAAGAGAAGAGACTGGGAACTCTGGTGGATGCAGATTTAAGGGGAATTTGTAATGAACAAGAAGTTGAAGAGGTGATCAAAGTGTGCTTACTGTGCACACAGAACAACCCTATGAGAAGGCCAAGAATGTCAGAAGTGGTGAGAATGCTGGAAATTAGTGAGGGTTTGCATGAAGAGTGGGAACAGTGGCAGAAATAA 1245 0.4305 MASFLLCTILVFAFLRKVSGDGEDEVLTAWKKKMNDPNDVLKNWDPTIVNPCTWFGVKCNGETVTRIDLGNANLSGELVPELGQLRNLQQLRLNNNNLSGNIPLSLTGLKLLQVLDLSNNQLSGEIPVGGSFSSFSPTSFLNNPGLRAPNGSPPPLTPPSPSGNSNNTAAIAVGVAVGAALLSVTLAVVLVYCRRRKSKVEHFFDVAAEDPPDEIDHHLGGQLKRFSLPELLVATDNFSSRNILGVGGFGKVYEGRLADGSRVAVKRLKEERAHDKDMQFQREVEMISMAVHRNLLRLLGFCSTLTERLLVYPLMVNGSVASCLRAFDLARLALENDHIMLLDWVREVVKEKRLGTLVDADLRGICNEQEVEEVIKVCLLCTQNNPMRRPRMSEVVRMLEISEGLHEEWEQWQK 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0156 414 FunFam Leucine-rich repeat receptor-like kinase 23 139 - -
Lele46g0156 414 ProSitePatterns Protein kinases ATP-binding region signature. 244 266 IPR017441 GO:0005524
Lele46g0156 414 MobiDBLite consensus disorder prediction 143 164 - -
Lele46g0156 414 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Lele46g0156 414 Pfam Protein tyrosine and serine/threonine kinase 241 335 IPR001245 GO:0004672|GO:0006468
Lele46g0156 414 SUPERFAMILY L domain-like 23 147 - -
Lele46g0156 414 ProSiteProfiles Protein kinase domain profile. 238 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0156 414 Gene3D Transferase(Phosphotransferase) domain 1 320 413 - -
Lele46g0156 414 Gene3D Ribonuclease Inhibitor 22 136 IPR032675 -
Lele46g0156 414 SUPERFAMILY Protein kinase-like (PK-like) 225 401 IPR011009 -
Lele46g0156 414 Gene3D Phosphorylase Kinase; domain 1 208 313 - -
Lele46g0156 414 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 330 410 - -
Lele46g0156 414 FunFam Somatic embryogenesis receptor kinase 1 203 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0156 Lele-ChrLele46 943656 946597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0156 325 414 Receptor kinase-like Gene Family AT1G34210 62.222 6.97e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele46g0156 PK_Tyr_Ser-Thr 1.1e-13 CL0016