Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0154 ATGGAACAGAAGAGCGTTTTGTTCTCTGCATTGAGTGTGGGGGTTGGTTTAGGGGTGGGGATCGGGTTGAGCCAGGGTCAAACCGTCAAGAAATGGGTTGGCGGGAATCGTGAGTCTCGAGAGCTTACTGGGGAGCTGATAGAGAACGAGCTCAAAAGGCAAGTGGTTGATGGAAAGATCGGCAACAATGTCACATTCGATGATTTTCCTTATTACTTAAGTGAAAGAACTCGAGTGTTGCTGACAAGTGCTGCATACGTTCATTTAAAACAACATCACTTCTCAAAACACACCCGAAACCTTACACCGGCGAGCCAAGCTATATTACTTTCTGGACCTGCAGAATTGTACCAACAGATGCTTGCCAAAGCTTTAGCACATTACTTTGAGTCAAAGTTGCTTTTGCTTGATGTTGCTGACTTCTCTAGGATGCTGCAGAGCAGATATGGATATGCAAAAAAGGAATCAACTTTTAAAAGATCCCTATCCGAGTTGACTATGGAAAGAGTTTCCAGTTTGTTTGGTTCCTTGCCAATCCCTTCACCCAGTGACAATAGAGGAACTTCACGTCGACAAATTAAAGGTATTGAAGCTTCCGATAATCCTCCAAAACTCCGTAGGAATGCCTCTGCTGCAGCTGATATGAACGATATTTCTTCCTATTCTGGATCGATAACTTCAGTTCCCCAGAAGCGCCCAAGCAGTATGTGCTTTGATGAAAAACTGTTTCTGCATTCACTCTACAAGTTAATCATATCAGCCAAGAGTTTGTCCCATGGATTGAGCCTGTTCCAGGAAGGAAAAACTAGTGGGACTGGTAATCTGAAGCTGGAGAATAATGTCCCTAAGAAGGACACTGCTGGAGAAGGAGTTGTCGGTGCAAAGAATGAAGTACGTGCTGATGCCGCAGCACCTGAAAAGAAAAGTGAAACAGAAAAATCTATCCCTGTGACCAAAAAAGATGGCGAGAACGCTGTTCCTGTCCCTGTGAAAGCAGAAGTTCCTGACAATGAGTTTGAGAAGCGAATAAGGCCTGAGGTTATTCCTGCAAATGAGATAGGGGTTACATTTGCAGACGTTGGTGCACTTGATGAAATTAAGAAATCGCTTCAAGAGATGGTCATGCTTCCCCTCCGTAGACCAGACCTCTTCAAAGGTGGTCTGCTTAAGCCATGTAGAGGCATATTGCTTTTCGGGCCACCTGGTACTGGGAAAACTATGATGGCAAAGGCGATCGCGAATGAAGCTGGAGCAAGCTTCATCAATGTCTCAATGTCCACCATTACTTCAAAGTGGTTTGGGGAAGATGAGAAGAATGTCCGAGCTTTGTTCACACTTGCAGCTAAGGTTGCCCCTACAATAATCTTTGTTGATGAAGTTGACAGCATGCTAGGACAGAGAACAAGAAATGGAGAACATGAGGCCATGAGGAAGATAAAAAATGAGTTCATGACTCATTGGGAAGGCCTGTTGACAAAACCAGGCGAGCAGATTCTTGTACTAGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATAAGAAGGTTTGAGCGCAGAATCATGGTAGGTCTTCCATCTGCTGAGAGCAGGGAACAGATCTTAAAAACCCTCCTATCTAAAGAAAAACATGAAAACATGGACTTCAAAGAGCTTGGGGTCATGACAGAAGGATATAGTGGAAGTGATCTCAAGAACTTATGCATGACAGCTGCATATCGACCTGTCCGGGAGCTCATGCAGAAGGAAATTTTGAAGGAAAAGGAAAAGAAGAAAAGAGAGGCAGAAGCCAAATTCACAGAAGATGCTACAAACATTAAAGAAAGTGGAAAAGATGAAGCGATTACCCTGAGGCCTTTAAACATGGAGGACATGAAATATGCTAAGTCTCAGATTGCTGCAAGTTTTGCTGCTGAAGGATCAATTATGAGTGAGCTGAAGCATTGGAATGATTTGTACGGAGAAGGAGGTTCAAGGAAGAAACAGCAGCTTTCATACTTCCTCTAG 2010 0.4383 MEQKSVLFSALSVGVGLGVGIGLSQGQTVKKWVGGNRESRELTGELIENELKRQVVDGKIGNNVTFDDFPYYLSERTRVLLTSAAYVHLKQHHFSKHTRNLTPASQAILLSGPAELYQQMLAKALAHYFESKLLLLDVADFSRMLQSRYGYAKKESTFKRSLSELTMERVSSLFGSLPIPSPSDNRGTSRRQIKGIEASDNPPKLRRNASAAADMNDISSYSGSITSVPQKRPSSMCFDEKLFLHSLYKLIISAKSLSHGLSLFQEGKTSGTGNLKLENNVPKKDTAGEGVVGAKNEVRADAAAPEKKSETEKSIPVTKKDGENAVPVPVKAEVPDNEFEKRIRPEVIPANEIGVTFADVGALDEIKKSLQEMVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRNGEHEAMRKIKNEFMTHWEGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREQILKTLLSKEKHENMDFKELGVMTEGYSGSDLKNLCMTAAYRPVRELMQKEILKEKEKKKREAEAKFTEDATNIKESGKDEAITLRPLNMEDMKYAKSQIAASFAAEGSIMSELKHWNDLYGEGGSRKKQQLSYFL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0154 669 MobiDBLite consensus disorder prediction 176 209 - -
Lele46g0154 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 587 IPR027417 -
Lele46g0154 669 Gene3D - 527 605 - -
Lele46g0154 669 CDD AAA 393 526 - -
Lele46g0154 669 MobiDBLite consensus disorder prediction 176 195 - -
Lele46g0154 669 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 668 - -
Lele46g0154 669 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 354 529 - -
Lele46g0154 669 ProSitePatterns AAA-protein family signature. 498 517 IPR003960 GO:0005524|GO:0016887
Lele46g0154 669 SMART AAA_5 391 528 IPR003593 -
Lele46g0154 669 Pfam ATPase family associated with various cellular activities (AAA) 395 525 IPR003959 GO:0005524|GO:0016887
Lele46g0154 669 Gene3D - 354 612 IPR027417 -
Lele46g0154 669 Coils Coil 586 606 - -
Lele46g0154 669 Pfam AAA+ lid domain 549 585 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0154 Lele-ChrLele46 931992 936876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0154 355 602 Calmodulin-binding Proteins AT3G56690 38.095 3.06e-43 166