Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0139 ATGAGAGGGGCGTCAGCTTCAACAACCAGAGAAGGGAGAGAGACAGCAATGGATTTCTTCATTGAAGGTGTGGGGGAGAGCTCCTCTCCACCGCGCACCTTGAGCGGTTTCGGCAACTTTGATGTGAGGAACGATGTGTACAATCGCTTAGTGGAAAAGGGTCATGGCCAAGAGGCGGATTTTCGTGAGCAGCTAGATGCTCACTTCAACCGATTGCCTCCAAGTTATTTGCTTGATGTTAACATAGACAAAGCTGAAGATGTCTTATTACATCAGAAACTTCTTGCTTTGGCAAGGGACCCAAGCAAGCGACCTGTGTACAATATACGCTTTTTGGAGGACATTTCTACTAGAATGGATGGTCAAGATCAACAAATTGTAGGTGCTAATTCTAGCACACGGCCATCTTCTCCCCCATCTAATGGGGAAGCTGCATCATCTCATAAGAGGGCAAGAGACTGTGCTGCTGAGTTTGAGCCTTGCTCTAAGCTTGAAGATCTAAATTTGGATGTTGGAAAGAACTCCAAGGAGGTTACTGACAATTACTCCCAGATGCATGAGGAACCGAGTGTTCCAGTTCATGAAGTTATATTTTCTGCCATTGACAAGCCAAAGCTTTTAAGCCAGCTGTCTGCGTTGCTGTCTGATATTGGACTTAACATACGCGAAGCACATGTTTTTTCAACGACTGATGGCTATTCTCTTGATGTATTTGTTGTGGATGGATGGCCAATAGAGGACACACATGGGTTGTATGAGGCCATGGAGAAAGCTGTTGCAAGAAGTGAGGGGTCTTGGTCTCGTTCTTTAAATTCCCATCTGACTGTGGAGAAGGCCATAATAGCAGAAGAAAAATCTGGTGATTGGGAAATAGACAGGAGGCTGCTTAAGATAGGAGATAGAATAGCATCTGGATCTTGTGGGGATCTGTATCGTGGAGTTTATCTTGGTCAAGATGTTGCTGTTAAGATTTTGAGATCTGAGCATTTGAACGATGCTTTAGAGGATGAGTTTGCTCAAGAAGTAGCAATTCTTAGGCAGGTGCATCATAAAAATGTTGTACGTTTCATTGGTTCATGTACAAAATCTCCACATTTGTGGATTGTAACAGAGTATATGCCTGGAGGAAGTCTGTATGATTACTTGCATAAAAACCATAATATGTTGGAGCTCTCTCAACTACTGAAGTTTGCGATTGATGTCTGCAAGGGAATGGAGTATTTGCACAGAAACAATATAATTCACAGGGATCTGAAGACAGCCAATCTATTGATGGATACCCACAATGTTGTTAAAGTAGCAGATTTTGGAGTAGCTCGGTTCCTAAATCAGGGGGGAGTGATGACAGCAGAAACTGGAACATATAGATGGATGGCTCCAGAGGTTATAAACCATCAACCCTATGATCAGAAGGCTGATGTATTCAGTTTTTCCATAGTATTGTGGGAACTAGTAACTGCAAAGGTACCATATGATGCCATGACTCCACTACAAGCTGCTCTAGGTGTGAGACAGGGGTTACGCCCGGAACTTCCAAAGCAAGGGCACCCTAAACTAATAGATTTAATGCAAAGGTGTTGGGAAGCAATTCCAGCCAACCGGCCATCCTTCTCTGAGATAACAGTTGACCTGGAAAATCTCCTTAAAGAAGTTGAGAATGATTCAGAAACTAACGGTGCTTGA 1683 0.4337 MRGASASTTREGRETAMDFFIEGVGESSSPPRTLSGFGNFDVRNDVYNRLVEKGHGQEADFREQLDAHFNRLPPSYLLDVNIDKAEDVLLHQKLLALARDPSKRPVYNIRFLEDISTRMDGQDQQIVGANSSTRPSSPPSNGEAASSHKRARDCAAEFEPCSKLEDLNLDVGKNSKEVTDNYSQMHEEPSVPVHEVIFSAIDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPIEDTHGLYEAMEKAVARSEGSWSRSLNSHLTVEKAIIAEEKSGDWEIDRRLLKIGDRIASGSCGDLYRGVYLGQDVAVKILRSEHLNDALEDEFAQEVAILRQVHHKNVVRFIGSCTKSPHLWIVTEYMPGGSLYDYLHKNHNMLELSQLLKFAIDVCKGMEYLHRNNIIHRDLKTANLLMDTHNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDAMTPLQAALGVRQGLRPELPKQGHPKLIDLMQRCWEAIPANRPSFSEITVDLENLLKEVENDSETNGA 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0139 560 SUPERFAMILY ACT-like 194 261 IPR045865 -
Lele46g0139 560 ProSiteProfiles Protein kinase domain profile. 296 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0139 560 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Lele46g0139 560 MobiDBLite consensus disorder prediction 127 151 - -
Lele46g0139 560 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 146 550 - -
Lele46g0139 560 Pfam Protein tyrosine and serine/threonine kinase 296 543 IPR001245 GO:0004672|GO:0006468
Lele46g0139 560 Gene3D Transferase(Phosphotransferase) domain 1 374 559 - -
Lele46g0139 560 FunFam Serine/threonine-protein kinase isoform 1 286 374 - -
Lele46g0139 560 SUPERFAMILY Protein kinase-like (PK-like) 286 549 IPR011009 -
Lele46g0139 560 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Lele46g0139 560 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Lele46g0139 560 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Lele46g0139 560 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Lele46g0139 560 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Lele46g0139 560 CDD STKc_MAP3K-like 302 544 - -
Lele46g0139 560 MobiDBLite consensus disorder prediction 127 144 - -
Lele46g0139 560 ProSiteProfiles ACT domain profile. 195 269 IPR002912 -
Lele46g0139 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Lele46g0139 560 SMART serkin_6 296 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0139 Lele-ChrLele46 811478 820639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0139 40 554 MAP Kinase Kinase Kinase AT4G35780 49.811 4.76e-178 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele46g0139 PK_Tyr_Ser-Thr 1.5e-73 CL0016