Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0135 ATGACCGCGACTGCGCCACCAGAAGCCGCGGCTTCCGTCGACGGTGCTGCAGAAATCGAGATGATGGATAGTATTGTTGGCTTGGATGCAACGAATTCAGGTGACGATATCGGTCAGAAGAGAAGTGGTGGTGGAGGCGGCGGCGGAGGCGGAGGAGGAGGGAACCGGTGGCCTCGCCAGGAAACTTTTGCTCTCTTGAAGATAAGGTCAGATATGGACGCTGCGTTTCGGGATTCCAGTCTTAAAGGCCCACTTTGGGAACAAGTTTCAAGGAAAATGGCAGAACTTGGATATAATAGAAGCGCAAAGAAGTGCAAGGAGAAGTTCGAGAACGTGTACAAGTACCACAAGAGAACCAAAGAAAGCAGAAATGGTAAACCAGAAGGCAAAACTTACAAATTCTTCGATCAATTACAAGCCCTTGAAAATAAATTCATTCTCTCTCCATCAAAACCACCACATCCTCCGCCACAGCCACAGCCACAACCTTCTTTCCAAACATGGCCTTGCAATATTAATAATGATCCTACCACCCCTACTATCTCTTACGTTACTACCATTCCATCCACTGTAAACCCTACTCTCATTTCTCCTCCTCGGCCGCCATCGGCGAATGTTGTTGCTGCCACCATCACCAACCCTAGGAATTTGTCAAACAAGAGCCTTTTCTCGTCTATCACGACCACCTCGACCTCGTCGTCAACTGCTTCCGATGAGGACATGGAAGAAAAGTACAGGAAGAAGAGAAAGATGAAGGACTACTTCCGGAGGCTGACGAGGCAAGTGCTGGCGAAGCAGGAGGAGATGCAGAAGAGGTTTCTAGAAGCCGTAGAGAAGAGAGAGCGTGAAAGAGAAGCACAGTTAGAAGCTTGGAGAACTCAAGAAATGGCCAGGATCAATAGAGAGCATGACATTCTAGTCCAAGAAAGATCCACCGCGGCCGCCAAGGACGCCGCCGTCATCGCTTTCCTCCAGAAGTTATCCGGAGGCCAGCAAAATCCTCCACCGCCACCTCCTCCGGCTCCACCGCAACCTGTAATGCAAGTAGTAGAACCTCGTGAACAACTGCAATTGCTGCCTATTGACAAGAAGTTTGAAATGCAGAAAGTGATGAACATAAACAACGGCCATAACAATCCAGTGAGTGTCTCTAATTCTTCTTGTTCTTCTTCAAGGTGGCCAAAGGCAGAAGTTCATGCACTGATAAGGCTAAGGACGAGCATGGACCCAAAGTATCTAGAGAACGGACCGAAAGGGCCGCTATGGGAGGACATATCGGCCGGAATGCAGAGGCTAGGGTACAATCGGAGCTCCAAGAGGTGTAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAGAGCAACAAGCAAAGGCGTGAGGATAGCAAGACTTGTCCTTACTTTCATGAGCTCGAAGCTCTTTACAAAGAGAAGAGCAAAACCGTCTTCGGTGCCGGCGGAAATCAGAATCACGAAATGATGATGGAGCCGTTGATGGTGCAGCCGGAGCAGCAATGGAGGCCACCTCCGCCACATGCGGAGGAGGAGGGGGAGGGTGGTGCTGCGAGGGAGAATGTAAACGATATCTTTCAGTTCGAAGCGGAAGAAAGAGGGGGAGAAGAGGAGGAGGAGACGGAAGAATTAGAAGACGATGATGTTATGGAAGATGAAGAGAGTATGGAAGATGATCATGAAGAAGAAGGACGTTATGAAGTTGCAGCGACGAATAACAAACTTCCTTCAGTGGATACTGTTGAATGA 1773 0.489 MTATAPPEAAASVDGAAEIEMMDSIVGLDATNSGDDIGQKRSGGGGGGGGGGGGNRWPRQETFALLKIRSDMDAAFRDSSLKGPLWEQVSRKMAELGYNRSAKKCKEKFENVYKYHKRTKESRNGKPEGKTYKFFDQLQALENKFILSPSKPPHPPPQPQPQPSFQTWPCNINNDPTTPTISYVTTIPSTVNPTLISPPRPPSANVVAATITNPRNLSNKSLFSSITTTSTSSSTASDEDMEEKYRKKRKMKDYFRRLTRQVLAKQEEMQKRFLEAVEKREREREAQLEAWRTQEMARINREHDILVQERSTAAAKDAAVIAFLQKLSGGQQNPPPPPPPAPPQPVMQVVEPREQLQLLPIDKKFEMQKVMNINNGHNNPVSVSNSSCSSSRWPKAEVHALIRLRTSMDPKYLENGPKGPLWEDISAGMQRLGYNRSSKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFHELEALYKEKSKTVFGAGGNQNHEMMMEPLMVQPEQQWRPPPPHAEEEGEGGAARENVNDIFQFEAEERGGEEEEETEELEDDDVMEDEESMEDDHEEEGRYEVAATNNKLPSVDTVE 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0135 590 MobiDBLite consensus disorder prediction 28 59 - -
Lele46g0135 590 PANTHER FI21293P1 41 518 - -
Lele46g0135 590 FunFam Trihelix transcription factor GT-2 57 118 - -
Lele46g0135 590 MobiDBLite consensus disorder prediction 507 590 - -
Lele46g0135 590 CDD GT1 392 456 - -
Lele46g0135 590 ProSiteProfiles Myb-like domain profile. 385 449 IPR001005 -
Lele46g0135 590 Pfam Myb/SANT-like DNA-binding domain 55 141 IPR044822 -
Lele46g0135 590 Pfam Myb/SANT-like DNA-binding domain 391 478 IPR044822 -
Lele46g0135 590 Gene3D - 57 118 - -
Lele46g0135 590 Gene3D - 393 454 - -
Lele46g0135 590 FunFam Trihelix transcription factor GT-2 393 454 - -
Lele46g0135 590 Coils Coil 274 294 - -
Lele46g0135 590 SMART sant 53 115 IPR001005 -
Lele46g0135 590 SMART sant 389 451 IPR001005 -
Lele46g0135 590 MobiDBLite consensus disorder prediction 539 569 - -
Lele46g0135 590 MobiDBLite consensus disorder prediction 149 164 - -
Lele46g0135 590 ProSiteProfiles Myb-like domain profile. 55 113 IPR001005 -
Lele46g0135 590 MobiDBLite consensus disorder prediction 146 165 - -
Lele46g0135 590 CDD GT1 55 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0135 Lele-ChrLele46 782010 784463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0135 47 509 Trihelix Transcription Factor Family AT1G76890 51.085 3.74e-140 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele46g0135 Myb_DNA-bind_4 1.3e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0135 46 782010 784463 Lele47g1190 47 17373386 17376699 hybridization
Lele46g0135 46 782010 784463 Lele48g1326 48 17469528 17477688 hybridization