Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0130 ATGGGTAGAAAGAAGCCGACCGCCCGTGACGATGATAACGTGGCCACTGCATCTGAAGGCGGTGGGAAGTCGAAAAAGAAGGGGCTAGTGATCGACGATGATGAGTATTCTATTGGAACTGAGCTATCTGAGGAACCGCCGGCTCAAGAAGAGAAGCCTGCAGCGACGGGAAAGAAGAAAGGTAACAAAGGTAACTCGAAGGCTTCAAAAGCCGAGGACGAAGATTTAGAGAAGGCGATGGAAGATAATGATGATGATGATGATGTACCCGAAGTTGTGTTTACTGGGAAGAAGAAGGGGAAATCAAAAAAGGGTGGTGGGAACAGTGCTTTTACTGGTTCGAGCTTTGGTTTGCTTGGTGACGAGGACGGTGGAGAAGATGATGATGAATACAAACAATCCTGCTTAAATGGTGGGGTGGACAATGACGACCACGACGAACCGGTTGCTACTTTTTCAGGCAAGAAGAAGTCCTCAAAGGGTTCCAACAAGAAGGGTGGTAGCTTGTTCACCGCATCAGCTTTTGATGCTATAGACGAATATGATGAAGGGGAGGTGATCGATAATTCTATAAAAGCCAGCCGTGAAGAGAACGATGACATGGATGAACCAGTTATTGCTATTGCGGGTGAGAAAAAATCATCGAAAAGTAGCAAGAAGGCTAGTGCCTTATTCACAGCATCTAGTTTTGGCGATAACGACGGAGAGCAGGACAAAAATGAACAAGAAGATGGGGATGAAGATGTTGCTCCGATCGTTTTCTCAGGGAAAAAAAAGAAGTCATCGAAGTCTTCCAAGAAGGCTGTTAATTCATTTAGTGCAGCTTTTGCTGAAGAGGATGTGGAAGATGATGATTCTGTGCTCGAGTCTTCTAGAGCCGATGAAGATAAGGCTGAGGACGAAGATTTTTCTGTTGTATTTTCAGGTAAAAAGAAGTCTTCAAAGAAAAACAAGACCGCTACTACCAAAGCTAGTGATGATTTTGAATCTGTCAATGAAGAGCAACTTAGCGTAGTAGACAACAATAAAGGTAATAAGAGTGAAGAGGTGATTGAAAATTTAAAAAATAAAAAGAAGAAGAATAAAAAGAGCGGAAGAACTGCTCACGAAGAGGAAGATTTGGACAAGCTTCTTGCTGAGCTTGGGGAGGGGCCTACAGTAAAATCTGCTTTCCCTCAAGCAGAGGATGATAAAGTTCAGGCTTCTTCTGAAGTAGCTGCTCCTGCTACTGCTGTGGTGAAAAAAGGAGGGAAAGAAGAGACCATGGAGTCAGCTGCTGCAAAAAAGAAGAAGAAGAATAAAAAGAGTGAAAGGACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTAGCTGAGCTTGGGGAGGGGCCTCCAGTAAAACCTGCCTCCCCTCCTGCAGAGGATGATAAAGTTCAGGCTTCTTCTGAAGTAGCTGCTCCTGCTACTACTGTGGTGGAGAAAGAAGGGGAAGAAGAGACAATGGAGTCGGCTGCTGCAAAAAAGAAGAAAAAGAAAAAGGAAAAGGAGAAGGAGAAGAAGGCTGCAGCAGCAGCAGCAAGTGCCCCTGATAATGAAAAGAATGAAGAAGTTAAACCCGATACCTCAGAATCGAGGAAGAATGATTCCAAGACTAAAGCGGCTGACAAGAAAGTTCCAAAGCATGTTAGGGAGATGCAAGAGGCACTGGCCCGAAGACAAGAGGCTGAAGAGAGGAAGAAGAGGGAAGAGGAGGAGAGGCTAAGGAAGGAAGAAGAAGAGCGGCGTAGGCAAGAGGAACTTGAGAGGCAAGCAGAAGAGGCAAGACGTAGGAAGAAGGAAAGGGAGAAGGAGAAGCTTCAGAAGAAGAAGCAAGAAGGCAAATTATTAACTGGTAAGCAAAAGGAAGAAGCTCGTCGTTTGGAGGCCATGAGGAAGCAGTTTCTTTCTGGTACAGGTGGTGTCCCACTTCCTAGCGGGGACTCTGGTGCACCGGCCAAACGACCCATATATCAGACAAGGAAGTCAAAACAAAATCATCATCACCAGAATGGCACTGCCCCTGTTAAGGCAGATGAAGATGTGGAAGCAAAGGAAAATCTGGAGACGACTCCTGATGCAGAGTCATTGGAACCAGAGAAGGTTGAAGTGGTTGAGGAAGTGCAGTATGAGGACAAAGTTAAACCGTCTGAAGATCTTCAAGAGGAAGAAGTTGAAGAGGATGATGAGGATGAATGGGATTCAAAGAGTTGGGATGATGTTAATTTAAATGGAAAAGGTGCATTTGCTGATGAGGAGGCTGACTCTGAACCAGAACCTGTAGTGAAAAAGGAGATAAAAAATGCTGCACCCCCAGCTGTTGTGAATTCAACAGGCACAACCAAGAAAGCTGCTTCTCAGCCTCCAACTGAGCAAATCGAAAGTAAAAAGCAGGTTGAGAAGCAACACCCTAAGCAGGATGGGCATCTACCACCAAATTCAGCTGTGCCTTCTCAGCCAAGTGGAGAGAACCTTCGTTCCCCAATTTGCTGTATTATGGGCCATGTGGACGCTGGTAAAACTAAGCTGCTGGATTGTATTCGACGTACTAATGTTCAGGAAGGTGAGGCTGGTGGCATCACGCAACAGATTGGTGCTACATACTTTCCTGCTGAGAACATACGTGAAAGAACAAAGGAACTAAAAGCTGATGCGAAGCTAAAAGTTCCAGGTCTACTAGTGATAGATACTCCTGGGCATGAATCTTTTACTAACTTAAGGTCAAGGGGTTCAGGTCTATGTGATATTGCAATTTTAGTTGTTGACATTATGCATGGATTACAACCTCAGACAATAGAATCGCTCAATCTATTGAAAATGAGGAATACAGAATTCATAGTTGCATTGAACAAAGTTGACAGACTTTATGGTTGGAAAGCATGCACTAATTCTCCAATTGTTAAGGCAATGAAGCAGCAAACCAAGGATGTGCAAAATGAGTTCAATATGAGAGTTACTCAGACTATCACTCAATTCAAGGAACAGGGGTTAAACACTGAATTGTACTATAAAAACAAGGAAATGGGAGAAACCTTCAGTATTGTACCTACCAGTGCTACAAGTGGTGAAGGTATCCCGGATTTGTTATTGTTGTTGGTTCAATGGACACAAAAAACAATGGCTCAGCAACTTACATACAGTGATGAAGTGCAGTGTACAGTTTTGGAGGTTAAGGTCGTTGAAGGTCATGGGACAACTATTGATGTTGTCTTGGTTAATGGTGTTCTTCATGAAGGAGATCAAATAGTTGTTTGTGGAATGCAGGGGCCTATTGTTACTACAATTCGAGCTCTATTGACACCTCATCCTATGAAGGAGCTCCGTGTTAAGGGCACATATCTCCATCATAAAGAAATTAAAGCTGCTATGGGCATCAAAATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGCACTGCTTTACATGTGGTGATGCCTGACGATGATTTAGAAGATGTTAAAGATGCAGCTATGGAAGATATGAAGACAGTCATGGGCAGGATTGACAAGAGTGGTGAGGGAGTTTGTGTACAGGCATCCACCCTTGGTTCTTTGGAAGCATTGCTGGAGTTTTTGAAAACACCAGAAGTGAATATTCCTGTTAGTGGTATAAGCATAGGCCCTGTACATAAAAAAGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGAAAAAGAAGTTTGCCACTATCTTGGCATTTGATGTCAAAGTCAATCAGGAGGCTAAAGATCTTGCGGAAGAACTAGGTGTGAAAATTTTTATGGCCGATATCATTTATCACCTATTTGACCAATTCAAGGCCTATATTGACAACATTAAGGAGGAGAAGAAGAAGGAAGCAGCTGATGAGGCAGTCTTCCCATGCGTTCTGAAAATCTTACCACGTTGCATTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATATTCTTGAAGGTGTTTTAAAGATTGGGACTCCAATTTGTATTCCTTCCAGAGATTACATTGATATCGGTCGCATTGCTTCCATTGAAAATAACAAAAAACCTGTTGATTATGCCAAGAAAGGGCAGCAAGTAGCCATTAAGATTGTTGGCAGCAATTCGGATGAACAACAAAAAATGTTCGGGAGGCATTTTGAGATTGATGACGAACTTGTAAGCCATATCACAAGGAGATCTATCGATATTCTCAAAGCTAATTATCGGGATGAACTGACTATGGAGGAATGGAGGCTGGTTGCGAAATTGAAAAACGTTTTCAGGATACAATGA 4269 0.4312 MGRKKPTARDDDNVATASEGGGKSKKKGLVIDDDEYSIGTELSEEPPAQEEKPAATGKKKGNKGNSKASKAEDEDLEKAMEDNDDDDDVPEVVFTGKKKGKSKKGGGNSAFTGSSFGLLGDEDGGEDDDEYKQSCLNGGVDNDDHDEPVATFSGKKKSSKGSNKKGGSLFTASAFDAIDEYDEGEVIDNSIKASREENDDMDEPVIAIAGEKKSSKSSKKASALFTASSFGDNDGEQDKNEQEDGDEDVAPIVFSGKKKKSSKSSKKAVNSFSAAFAEEDVEDDDSVLESSRADEDKAEDEDFSVVFSGKKKSSKKNKTATTKASDDFESVNEEQLSVVDNNKGNKSEEVIENLKNKKKKNKKSGRTAHEEEDLDKLLAELGEGPTVKSAFPQAEDDKVQASSEVAAPATAVVKKGGKEETMESAAAKKKKKNKKSERTAQEEEDLDKLLAELGEGPPVKPASPPAEDDKVQASSEVAAPATTVVEKEGEEETMESAAAKKKKKKKEKEKEKKAAAAAASAPDNEKNEEVKPDTSESRKNDSKTKAADKKVPKHVREMQEALARRQEAEERKKREEEERLRKEEEERRRQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRKQFLSGTGGVPLPSGDSGAPAKRPIYQTRKSKQNHHHQNGTAPVKADEDVEAKENLETTPDAESLEPEKVEVVEEVQYEDKVKPSEDLQEEEVEEDDEDEWDSKSWDDVNLNGKGAFADEEADSEPEPVVKKEIKNAAPPAVVNSTGTTKKAASQPPTEQIESKKQVEKQHPKQDGHLPPNSAVPSQPSGENLRSPICCIMGHVDAGKTKLLDCIRRTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLQPQTIESLNLLKMRNTEFIVALNKVDRLYGWKACTNSPIVKAMKQQTKDVQNEFNMRVTQTITQFKEQGLNTELYYKNKEMGETFSIVPTSATSGEGIPDLLLLLVQWTQKTMAQQLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTALHVVMPDDDLEDVKDAAMEDMKTVMGRIDKSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKKKFATILAFDVKVNQEAKDLAEELGVKIFMADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVLKILPRCIFNKKDPIVLGVDILEGVLKIGTPICIPSRDYIDIGRIASIENNKKPVDYAKKGQQVAIKIVGSNSDEQQKMFGRHFEIDDELVSHITRRSIDILKANYRDELTMEEWRLVAKLKNVFRIQ 1422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0130 1422 MobiDBLite consensus disorder prediction 778 798 - -
Lele46g0130 1422 Gene3D Translation factors 1285 1422 - -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 678 725 - -
Lele46g0130 1422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 831 1121 IPR027417 -
Lele46g0130 1422 FunFam Eukaryotic translation initiation factor 5B 824 1052 - -
Lele46g0130 1422 FunFam Eukaryotic translation initiation factor 5B 1285 1422 - -
Lele46g0130 1422 CDD IF2_eIF5B 833 1043 - -
Lele46g0130 1422 SUPERFAMILY Translation proteins 1289 1421 IPR009000 -
Lele46g0130 1422 Gene3D - 1174 1278 IPR036925 -
Lele46g0130 1422 Gene3D Translation factors 1053 1173 - -
Lele46g0130 1422 CDD IF2_aeIF5B_IV 1293 1388 - -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 524 636 - -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 385 828 - -
Lele46g0130 1422 Gene3D - 825 1052 IPR027417 -
Lele46g0130 1422 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 515 1415 IPR015760 -
Lele46g0130 1422 Coils Coil 487 519 - -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 219 233 - -
Lele46g0130 1422 TIGRFAM small_GTP: small GTP-binding protein domain 835 961 IPR005225 GO:0005525
Lele46g0130 1422 MobiDBLite consensus disorder prediction 189 372 - -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 485 502 - -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 290 309 - -
Lele46g0130 1422 CDD aeIF5B_II 1054 1164 - -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 436 451 - -
Lele46g0130 1422 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 830 1046 IPR000795 GO:0003924|GO:0005525
Lele46g0130 1422 MobiDBLite consensus disorder prediction 726 741 - -
Lele46g0130 1422 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1155 1284 IPR036925 -
Lele46g0130 1422 FunFam Eukaryotic translation initiation factor 5B 1172 1278 - -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 189 218 - -
Lele46g0130 1422 Coils Coil 551 622 - -
Lele46g0130 1422 PRINTS GTP-binding elongation factor signature 834 847 IPR000795 GO:0003924|GO:0005525
Lele46g0130 1422 PRINTS GTP-binding elongation factor signature 950 959 IPR000795 GO:0003924|GO:0005525
Lele46g0130 1422 PRINTS GTP-binding elongation factor signature 914 925 IPR000795 GO:0003924|GO:0005525
Lele46g0130 1422 PRINTS GTP-binding elongation factor signature 898 908 IPR000795 GO:0003924|GO:0005525
Lele46g0130 1422 MobiDBLite consensus disorder prediction 130 153 - -
Lele46g0130 1422 FunFam eukaryotic translation initiation factor 5B 1053 1172 - -
Lele46g0130 1422 Pfam Translation-initiation factor 2 1157 1271 IPR023115 -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 1 169 - -
Lele46g0130 1422 Pfam Elongation factor Tu GTP binding domain 834 1042 IPR000795 GO:0003924|GO:0005525
Lele46g0130 1422 Pfam Elongation factor Tu domain 2 1069 1146 IPR004161 GO:0005525
Lele46g0130 1422 Coils Coil 424 452 - -
Lele46g0130 1422 MobiDBLite consensus disorder prediction 755 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0130 Lele-ChrLele46 732434 739379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0130 1 42 Eukaryotic Initiation Factors Gene Family AT1G76810 63.043 1.87e-06 50.8