Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0129 ATGGATTCCAACCAAATACCCAAAATTTCCCTCCAAAGCACCCACCTTGAGGCACAAATCACACCTCTAGAGACCGACCAGATCACTAATGAAAACAAAGATTTTGATTACTCCAAAAGATCTCAATGGCTAAGGGCAACAGTTTTGGGAGCCAATGATGGGTTGGTGTCCACAGCATCTCTAATGGTGGGTGTGGGAGCAGTAAATCAAGACATCAAAGCCATGATCCTCTCAGGCTTTGCTGGTCTTGTGGCCGGAGCTTGCAGTATGGCCATCGGAGAGTTCGTGTCGGTGTACTCGCAGTTAGACATCGAGATCGCTCAGATCAAGAGAGACAATAACAAGAAAAGTGGGGAAGATCAGAAAGAAGAAGAGAAAGAGGGATTGCCAAAGCCATTTCAAGCAGCCGCAGCATCAGCTTTGGCATTTGCAGTGGGAGCAATGGTGCCATTGCTGGGAGCTTCGTTTATAAAAGAGTACAGGTTAAGGTTAGGGGTGGTTGTGGGTGCAGTGAGCTTGGCCTTGGTGGTCTTTGGATGGCTAAGTGCAGTTCTTGGCGGGTCTCCGGCTCTGAGATCTGTGGTTAGGGTCTTGGTTGGGGGGTGGTTAGCCATGGCCATAACTTTTGGGTTAACCAAGTTGATTGGCTCAACTAGACTCTAG 663 0.4842 MDSNQIPKISLQSTHLEAQITPLETDQITNENKDFDYSKRSQWLRATVLGANDGLVSTASLMVGVGAVNQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQIKRDNNKKSGEDQKEEEKEGLPKPFQAAAASALAFAVGAMVPLLGASFIKEYRLRLGVVVGAVSLALVVFGWLSAVLGGSPALRSVVRVLVGGWLAMAITFGLTKLIGSTRL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0129 220 CDD Nodulin-21 42 190 - -
Lele46g0129 220 Pfam VIT family 44 126 IPR008217 GO:0005384|GO:0030026
Lele46g0129 220 Pfam VIT family 124 212 IPR008217 GO:0005384|GO:0030026
Lele46g0129 220 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 215 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0129 Lele-ChrLele46 728464 729126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0129 16 220 Nodulin-like Gene Family AT3G43660 65.366 9.78e-95 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0129 46 728464 729126 Lele47g1197 47 17432943 17433614 hybridization