Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0104 ATGAACTCTTTCGTTCCAAAACGACACCGACATTGTTCAGATCAGGAGATTGCGATCATATCAAAACTTGATTCCACGTGGCACCCACACTTTAAATCTCACTCAAAGCCATTCAGCCTACCAGGCGAGCTCGTGAGGTTCACGGCAGAACGCGGTGGCGACGAGGGAAACACTGACTACCGGCAGTCGCAGTCGGCAGGATTTAACGAAGCTGAAGAGGTGACGACAATGGCGGCTGAACCAGGGGAACCTGTGATGTCAGGGTATTGCAGAGCCGGAGAGTTGTCGGCGATGGTTTCGGCTCTGACGCATGTGGTGTCGTCAGGTTCTTCTGGACACAGAGACACTAATGAATGGATCCAAGGAATTAGCGGTTTTCCTATGATGTCATCTTTTGGCTATGTTCCGTCTCCTCGTTTGTCTCCTTCTTCATCTTCATCAGGTCCTGTTATGGGCTCTGCCTCTGGTTCATGGGTAGGTCAGAAAAGAGGCCGTCAAGAAGAAGAAGAATCTCTATACAAAGCCGCCATTGGCGACTTCACTGCACCATTACAGAACGAGTCAGCTTCATCAGTGACGGAGGTGGAAGCTTCGAGTATTGCTACCACTGATGCAACGGAGGCGGTGGCTGCCGTGACGGTACCGGTGATGCCATCGGGTGAAACTGGTTCGTACGAAGAAACAGGGGAGAGGAGGAGGAGGTACAGAGGAGTGAGGCAGAGGCCGTGGGGTAAGTGGGCGGCGGAGATTCGCGACCCCTACAAGGCGGCAAGGGTCTGGCTTGGCACGTTCGACACGGCGGAGGCGGCCGCCAGAGCTTATGACGAAGCCGCATTGAGGTTCAGAGGCAGCAGAGCCAAACTAAACTTTCCGGAAAACGTCAGAGCAGTTCCGGTGCCCTTTCAAAATTTTCCGGCCACCAGCCACGTCCTTCAGCAGTCCCCGGCGGCGCTTCCGTTCATGCCGGCGTCATCTTATCAGGGGCCCACTGATTTGTTCAGAGACTATTGGAATTACACCCAGCTGCCACAGAGCTCAGGCGATTTCCAAGGTCAACGGCAGCCACAGCCACCGCAGCAGATACCTCCGATTTCACAGCAGCAGTGGCTCTATAATTCTCAATTGAGTGCTCTTCAATCGTCTTCTTCGTTGTTTTCAGCGGCATCATTCTCGACTTCTTCATCTCCCACCGCATTTTCGCCTTCTAGTCAGTTATCCTCTGCTTCATTTCCCCTGCCTTCTGGTCAGCAAATAGGATATTTCCGACCACCGGGAAACCAGACTCATGGCGGAGAAAGCTCATATTTTCCGATGCCAACATGGTCAGATACCGGTAACTTTCCTCCACCGTCTAGGTGA 1359 0.5298 MNSFVPKRHRHCSDQEIAIISKLDSTWHPHFKSHSKPFSLPGELVRFTAERGGDEGNTDYRQSQSAGFNEAEEVTTMAAEPGEPVMSGYCRAGELSAMVSALTHVVSSGSSGHRDTNEWIQGISGFPMMSSFGYVPSPRLSPSSSSSGPVMGSASGSWVGQKRGRQEEEESLYKAAIGDFTAPLQNESASSVTEVEASSIATTDATEAVAAVTVPVMPSGETGSYEETGERRRRYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRAVPVPFQNFPATSHVLQQSPAALPFMPASSYQGPTDLFRDYWNYTQLPQSSGDFQGQRQPQPPQQIPPISQQQWLYNSQLSALQSSSSLFSAASFSTSSSPTAFSPSSQLSSASFPLPSGQQIGYFRPPGNQTHGGESSYFPMPTWSDTGNFPPPSR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0104 452 PRINTS Ethylene responsive element binding protein signature 235 246 IPR001471 GO:0003700|GO:0006355
Lele46g0104 452 PRINTS Ethylene responsive element binding protein signature 257 273 IPR001471 GO:0003700|GO:0006355
Lele46g0104 452 Gene3D AP2/ERF domain 233 293 IPR036955 GO:0003700|GO:0006355
Lele46g0104 452 Pfam AP2 domain 234 283 IPR001471 GO:0003700|GO:0006355
Lele46g0104 452 MobiDBLite consensus disorder prediction 139 154 - -
Lele46g0104 452 FunFam Ethylene-responsive transcription factor 2 233 292 - -
Lele46g0104 452 SUPERFAMILY DNA-binding domain 234 292 IPR016177 GO:0003677
Lele46g0104 452 ProSiteProfiles AP2/ERF domain profile. 234 291 IPR001471 GO:0003700|GO:0006355
Lele46g0104 452 MobiDBLite consensus disorder prediction 344 363 - -
Lele46g0104 452 MobiDBLite consensus disorder prediction 139 165 - -
Lele46g0104 452 PANTHER DNA-BINDING DOMAIN 199 379 IPR044808 GO:0003700|GO:0009873
Lele46g0104 452 MobiDBLite consensus disorder prediction 396 452 - -
Lele46g0104 452 SMART rav1_2 234 297 IPR001471 GO:0003700|GO:0006355
Lele46g0104 452 CDD AP2 242 293 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0104 Lele-ChrLele46 596261 598733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0104 197 309 AP2-EREBP Transcription Factor Family AT2G33710 55.462 6.85e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele46g0104 AP2 2.9e-14 CL0081