Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0079 ATGGATATCAGTAATAATGGTTCTATATCAAGTGATCAGCATCGCAAACCTCATGAATCAGTTTCAAAAAGTGCAGATTCATTATCTGTTTCTCCATCGCAAACTTCTCCAAAGTCACCGAGACCCTGTGGCTCTCCAAGGTCCCCTAGGTTCCAAGTCATCAAGGGCGGCAGGCAAAGTTCAAATCATGATAAGCACCCACAATCTCCCAGAGATGCATGTCCCAAGAAAGATTCATCCCCCGTTACTTCATTGAAAATTTCTCCATCGTCACCAACATCTACCACTTCTCCAAGTTCTCCAAGGTTACCTGGCCATAGTCCAAAGAATGAAAGGCATTCACGTTCGCCAAGAGATGGACGACCAAAGAAAGGAGGTTGCGGAGGGAAAGGCACGTGGGGAGGATTGCTTGATACTGAAGACATGAACATTATTGACCCTCGTGATCCGAACTATGACAGCACTGAGGAAAAGGAACCTTCAAATGAAAAGAATAAAATGGGAGGGGAGTTAGATGAGTACAAGAAGAAAGCTACAATAATAGTGCAGGAATATTTTACAACTGATGATATTGTTGCTGTAAAAAATGAAATGAAAGAACTTGGAACACCATACTTTAGCTACTATTTTGTCAAAAAGCTTGTTTCAATGTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTGTTCTGCTATCTGCACTTTATGCTGACACAATTGATCCTTCTCAAGTTTACAAGGGCTTCAGTAAACTAGTTGAATCTGCAGATGACCTGATTGTAGACATACCAGACGCGGTCGATGTTCTAGCGCTTTTCTTGGCTCGAGCCGTTGTTGATGACATACTTCCTCCTGCATTTCTGAACAAACAGATGGCTTACTTACAGAAGGATTCGAAAGGGGTTGAAGTCTTGAAAAAGGCAGAGAAGAATTATCTTGCAGCGCCTCTGCATGCAGAAATTATAGAGCGCCGGTGGGGAGGAAGTAAGAATATGACAGTTGATGATGTGAAGGCAAGAATAAACAATTTGTTGATAGAATATGTAACAAGTGGTGACAAGAAAGAAGCTTTTAGATGCATTAAGGATTTGAAAGTTCCATTCTATCATCATGAGATAGTGAAAAGGGCTCTTATAATGGCAATGGAGAGGAGCCAAGCAGAAGGTCCCCTACTAGATCTCTTGAAAGAAGCAGCTGAAGAAGGTTTTATCAACTCCAGTCAAACCTCGAAGGGCTTTGATCGGTTGATTGACACTGTCGATGACTTATCACTCGACATACCGAATGCGCGTGAAATTCTCCAAAAGCTAATGTCCAAGGCAGCATCTGAGGGTTGGTTATGTGTTTCATCTTTAAAATCACTCTCACTGGAGCCAGAAAAGAAGTCACTAAAAGAAAGTTTAGCCAGAAGTTTCAAGGTAAAGGCTCAGTCCATAGTTCAAGAGTACTTCTTGACAGGTGATATATTTGAAGTAATTAGTTGTCTTGAGCAAGAAAACAACACTTGCTCTGCACAACTCAATGCAATCTTTGTCAAGAGACTCATAACTTTGGCTATGGATCGGAAGAAGCGCGAGAAGGAAATGGCCTCGGTTCTGCTTTCGTCTCTGTGTTTCCCAGCTGATGATGTAGTCAATGGTTTTGTGATGTTGATAGAATCAGCAGATGACACTGCTCTGGACAATCCAGTAGTGGGAGAAGATCTTGCCATGTTCCTGGCCAGAGCAGTAGTGGATGAAGTCCTGGCCCCACAACATTTAGAAGAGATTGGAACACAATGTCTGGGACCAGATTCAATAGGAAGCAAAGTTCTTCAAATGGCTAAGTCATTGCTAAAGGCAAGGCTTTCTGGGGAGAGAATATTAAGGTGTTGGGGTGGAGGGGGAAGCAGCAGAAGCGGGTGGGAAATTGAAGATGTTAAGGACAAGATTGTAAACCTTTTGGAGGAGTATGAATCTGGAGGCGACATAAGGGAGGCGTGTCGGTGTATGAAAGAACTTGGAATGCCATTTTTCCACCATGAGGTGGTGAAGAAAGCTCTGGTGAAAATCATTGAGAAGAAGAATGTCAGGTTGTGGGGCCTGCTCAAGGAATGCTTTGAATCTGGACTGATAACTATGAACCAGATGATGAAGGGCTTTGGAAGGCTAGCAGAATCTCTTGATGACTTGGCTTTGGATGTTCCTGATGCTAAGAAACAGTTTATACACTACGTAGAACGAGCAAAGAGCTCAGAATGGTTGGATTCTTCATTCAGTCTCAGCAAATTTGAACATTCAACAGAGAATGGAACCTCCTAA 2304 0.4253 MDISNNGSISSDQHRKPHESVSKSADSLSVSPSQTSPKSPRPCGSPRSPRFQVIKGGRQSSNHDKHPQSPRDACPKKDSSPVTSLKISPSSPTSTTSPSSPRLPGHSPKNERHSRSPRDGRPKKGGCGGKGTWGGLLDTEDMNIIDPRDPNYDSTEEKEPSNEKNKMGGELDEYKKKATIIVQEYFTTDDIVAVKNEMKELGTPYFSYYFVKKLVSMSMDRHDKEKEMAAVLLSALYADTIDPSQVYKGFSKLVESADDLIVDIPDAVDVLALFLARAVVDDILPPAFLNKQMAYLQKDSKGVEVLKKAEKNYLAAPLHAEIIERRWGGSKNMTVDDVKARINNLLIEYVTSGDKKEAFRCIKDLKVPFYHHEIVKRALIMAMERSQAEGPLLDLLKEAAEEGFINSSQTSKGFDRLIDTVDDLSLDIPNAREILQKLMSKAASEGWLCVSSLKSLSLEPEKKSLKESLARSFKVKAQSIVQEYFLTGDIFEVISCLEQENNTCSAQLNAIFVKRLITLAMDRKKREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVGEDLAMFLARAVVDEVLAPQHLEEIGTQCLGPDSIGSKVLQMAKSLLKARLSGERILRCWGGGGSSRSGWEIEDVKDKIVNLLEEYESGGDIREACRCMKELGMPFFHHEVVKKALVKIIEKKNVRLWGLLKECFESGLITMNQMMKGFGRLAESLDDLALDVPDAKKQFIHYVERAKSSEWLDSSFSLSKFEHSTENGTS 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0079 767 FunFam programmed cell death protein 4 163 316 - -
Lele46g0079 767 Pfam MA3 domain 339 448 IPR003891 -
Lele46g0079 767 Pfam MA3 domain 474 583 IPR003891 -
Lele46g0079 767 Pfam MA3 domain 642 750 IPR003891 -
Lele46g0079 767 Pfam MA3 domain 175 285 IPR003891 -
Lele46g0079 767 ProSiteProfiles MI domain profile. 173 294 IPR003891 -
Lele46g0079 767 MobiDBLite consensus disorder prediction 23 41 - -
Lele46g0079 767 Gene3D - 324 456 - -
Lele46g0079 767 Gene3D - 624 756 - -
Lele46g0079 767 FunFam programmed cell death protein 4 462 617 - -
Lele46g0079 767 SUPERFAMILY ARM repeat 172 331 IPR016024 -
Lele46g0079 767 SMART ma3_7 641 750 IPR003891 -
Lele46g0079 767 SMART ma3_7 473 584 IPR003891 -
Lele46g0079 767 SMART ma3_7 174 285 IPR003891 -
Lele46g0079 767 SMART ma3_7 338 449 IPR003891 -
Lele46g0079 767 ProSiteProfiles MI domain profile. 337 458 IPR003891 -
Lele46g0079 767 PANTHER PROGRAMMED CELL DEATH 4 80 753 IPR039778 GO:0045892
Lele46g0079 767 SUPERFAMILY ARM repeat 333 454 IPR016024 -
Lele46g0079 767 Gene3D - 161 313 - -
Lele46g0079 767 Gene3D - 459 616 - -
Lele46g0079 767 ProSiteProfiles MI domain profile. 472 593 IPR003891 -
Lele46g0079 767 SUPERFAMILY ARM repeat 471 631 IPR016024 -
Lele46g0079 767 MobiDBLite consensus disorder prediction 1 170 - -
Lele46g0079 767 MobiDBLite consensus disorder prediction 81 104 - -
Lele46g0079 767 ProSiteProfiles MI domain profile. 640 759 IPR003891 -
Lele46g0079 767 MobiDBLite consensus disorder prediction 142 170 - -
Lele46g0079 767 MobiDBLite consensus disorder prediction 106 125 - -
Lele46g0079 767 MobiDBLite consensus disorder prediction 59 73 - -
Lele46g0079 767 SUPERFAMILY ARM repeat 636 754 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0079 Lele-ChrLele46 449939 452621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0079 640 736 Eukaryotic Initiation Factors Gene Family AT4G30680 30.000 6.14e-06 46.6