Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0074 ATGTCTGGTAGGAAATTGAAGCTCGACGTGATCCGGGAGACTGACATCTACAAGTGGGACCCTGAGGAATTGCCTGCGCAATCTGGACTAAAAACTGGAGATAGACAATGGTTTTATTTCAGTCCTAGAGATAGGAAGTACCCTAATGCTGCCAGGTCAAGTAGAGCAACAAGACATGGGTACTGGAAAGCTACAGGAAACGATCGAAATGTGACATACACTTCCCGAACAGTTGGAGTTAAAAAGACACTGGTTTTTTATAAGGGCAGAGCGCCTAATGGTGAGCGCACTGATTGGGTTATGCATGAGTACACCTTGGATGAACAAGAGCTTCAAAGATGCCAAGGCATTAAGGACTATTATGCACTCTACAAGCTTTACAAGAAAAGTGGACCTGGCCCTAAAAACGGTGAGCAGTATGGTGCACCATTTAATGAAGAAGAGTGGGCAGATGATGATTTTGTAGATTGCAATGTAAACTCAGCTGAGACTGAAGTTCCAACACAGCGACGTAATGGTGTTACTTCGGCTGATACTGTCAATGCCAATGATCCAGTGCAGCCATTGCTTGATGATGAAATTGAGATCATGAAGAAACTTTTGGACGACGATTCTCTCCTCGGACAGCAAAATGTGAATAGTCATCCTGTCTTACCTCTGGGGGTTGCTGAGGAAACGCAGAATGGTTTGGTTGATCAATTCTGCAGGGAAGTCATGTTTTCTGAGCCATTCGGAATGTTTCACTCGAGTGGTGTTCAGCACTGTGGAGTGGGTCCCAGTTCTGACTCCCCTCAGTCAGCTATTTCTCTCCTGCAACTGTCTGAAGCTCCTGTGGCCACTTCTAGTCCCAACACTAAAGGAGCGGGCTTGTGCGAGGATGACTTCTTGGAATTGGATGATCTCATTGGTCCTGAACATACATTGCCAAACATAAATAAGCCTGTGGAGAACCTGCAGTTTGAAGATGGATTAAGTGAACTTGATCTGTACCATGATGCGCAGATGTTTCTTCATGACATGGGGCCAATTTCACATGCATATATGAACACTCTGGATAGTGCTATTGCAGATCAAAATTATGAGCTACTGTCGAATCAAGAAAATGCAAATCAAACTGGTGAACTCATGATGCATGCTCAAAGAAACATCCTGCATTCAGCAGAACACATCAGTGTTTCTACATCTCTTCCAACATCAGGTGTATATCAAGAGAAAGGGACCTTGGAATTCAGCAAGGGCAAGGGCCTGCAGAATTTTTAG 1260 0.4437 MSGRKLKLDVIRETDIYKWDPEELPAQSGLKTGDRQWFYFSPRDRKYPNAARSSRATRHGYWKATGNDRNVTYTSRTVGVKKTLVFYKGRAPNGERTDWVMHEYTLDEQELQRCQGIKDYYALYKLYKKSGPGPKNGEQYGAPFNEEEWADDDFVDCNVNSAETEVPTQRRNGVTSADTVNANDPVQPLLDDEIEIMKKLLDDDSLLGQQNVNSHPVLPLGVAEETQNGLVDQFCREVMFSEPFGMFHSSGVQHCGVGPSSDSPQSAISLLQLSEAPVATSSPNTKGAGLCEDDFLELDDLIGPEHTLPNINKPVENLQFEDGLSELDLYHDAQMFLHDMGPISHAYMNTLDSAIADQNYELLSNQENANQTGELMMHAQRNILHSAEHISVSTSLPTSGVYQEKGTLEFSKGKGLQNF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0074 419 Gene3D NAC domain 1 132 IPR036093 GO:0003677|GO:0006355
Lele46g0074 419 Pfam No apical meristem (NAM) protein 3 106 IPR003441 GO:0003677|GO:0006355
Lele46g0074 419 SUPERFAMILY NAC domain 3 129 IPR036093 GO:0003677|GO:0006355
Lele46g0074 419 ProSiteProfiles NAC domain profile. 1 129 IPR003441 GO:0003677|GO:0006355
Lele46g0074 419 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0074 Lele-ChrLele46 430894 434095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0074 4 366 NAC Transcription Factor Family AT1G34190 46.400 5.97e-89 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele46g0074 NAM 1.3e-22 No_clan