Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0054 ATGGCTAGGTATGACTGTATATCGTCTGTCCTCTTCGTTGCTCTCTGCTTTTGGTTCTGCCCAATGGTGTTGTCTGAGCTATCTCAGAACCAAACCAACACCATGACCACACTCTCCCAGCGTCTTGATGGAACTGGATTAACTGATTCATGGAACATTGACACAAACCCACATCCATGTAAATGGGAGGGAGTTGACTGCGATCGCACTAATTCCTCTATAATCCAATTTCGGCTATCTGGGTATTCCATCTCTTCTTCCGAATTTCTCACTCTTCTTTGCCAAATTGAAAGTTTGCAGCATCTTGATCTTTCTCGTAACATCCTTAGCTCAATTCCAGACAAATTCATCACTGACTGTGGGAAGGTTGAGGGATTAAAGTTGCTCAATTTCAGTAGAAACGACATAAGGGGTCCCTTGCCTACTTTTCGTGGATTTGATGGGTTAGAATCCCTGGATATGTCTTTCAATTCGTTTTCAGGGAAAATTGATTCTGAGTTAGCTGGATTAGCTAGCCTCAAGAGCTTAAATCTTAGTACCAATTTTTTCAATGGGTCCCTTCCTACCAAACTGGGAAATTCCTCGGCTTTGGACCAGCTTGTGCTAAGTGGTAATCAATTTGAAGGAACAATCCCTGCTGAAATCCTGAGTTACACAAATTTGACTTTGCTTGATCTTCAACAAAATAAGCTTTCAGGGTCTATTCCTAGCATCATAGGAGATCTATCCAAATTGGAAACTTTGATTCTGTCCTCTAATCTCCTTGGAGGGGAAGTCCCAAGCGCACTCTCGAACATCAAAGCCCTCTTCCGTTTTGCAGCCAATGAAAACGACTTTACTGGCTTTGTTCCCAGCGGAATTACAAGATTTCTCAATAACTTGGATCTTAGTTATAATAAGTTGTCCGGGCCAATTCCAGCAGACCTTTTTTCACACTCAAATCTGGTGTCTGTGGATTTGTCCTATAACTCGTTATCTGGGCCATTACCTGCAGACATTTCTTCTAGCATTATCAGGTTGAGATTAGGGGGGAATTCTCTAAATGGGACGATACCATCAAAACCATTTGTGACGGCTCTGAGTATGACGTATATCGAACTTGAAGCCAATAACTTGACAGGCCAAATACCTGTTGAGGTGGGTTCTCGCCAGAGTTTGGCCTTGTTGAACTTGGCTCACAATCGTCTATCTGGGGAATTACCTGCAGAGCTTGGTAAGCTTAGCAATCTTCAAGTCTTGCAGCTTCAAGGGAATAAGCTTTCTGGACAAATACCAACTGAAGTGGCTCAGCTTCAGAAGTTGTCAACGCTGAATTTGAGCGACAATTCTCTGAATGGAACCATTCCACCAGCAATGTTCAATTTGGCAAAGCTTAATAAGCTTTACTTACAGCAAAACAATCTCAGTGGCGCTATTCTCACATCTATAAGCGGCATGGATTCTCTTATCGAACTTCAACTTGGAGAAAACCAGCTAAGTGGCTTGATTCCAAAAATGCCATCGAATCTTCAGATTGCCTTGAATCTCAGCAGCAATCTCTTTATAGGGCCTATTCCTAGCACTCTTGCTGGGTTGAATAAACTGGAAATTTTGGATCTTTCAAATAACAAATTTAACGGTAAAATTCCTGATTTTCTTACCAGAATGCCGGCTTTGACACATTTGGAACTTTCTAAGAATGAGCTGTATGGTGTCATTCCCGACTTTAATTCTCATGTTAAAGTTGATTCGGATGGAAATAATGGTCTCTTAAACAAAACTGCAACTTCCAACATTTCCCCAGGATCTTCAAAGGGAAATCCTGTTGTTGTGGCAGTTCTTGTTGCAATTGCAGCTGCAGTTTTTCTTGTTGGCCTGGTCACTGTGCTGGCCGTATTAATCTCAAGGCGCTTATACAGGGTAAAGGATGAACACTTGCAACCACCTGAAGACCCTCAACCCCCTAAGGTCATTCAAGGTAACTTATTAACTCCAAATGGAATTCACAGATCCAACATTGATTTCTCTAAGGCCATGAAAGATGTTGCTGAAACATCAAACATTACACTGAAAACAAGGTTTTCAACTTATTACAAGACTATTATGCCTTCTGGGTCAATCTACTTTGTCAAGAAGCTTAACTGGAGCGAGAAGCTATTCCCTCTGGGCAGTCATGATAAATTTGGCAAAGAGATAGAGGTCTTGGCAAAATTGAACAATTCAAATGTCATGACTCCTTTGGCTTATGTTCTGTCCGCCGACAGCGCTTATATACTGTATGAATTTATGTCAAATGGCTCTCTTTATGACGCTCTTCACGGAAGCATGGGAAGCTCCTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGGGCGGCTCAAGGTCTCTCTTTTCTGCACGGATTTACCTCAGGTCCAATTCTTCTTCTTGACCTATCAAGCAAAAGTATAATGCTGAAGTCCCTCAAGGAGCCTCTAGTTGGAGATATTGAACTCTACAAGGTGATTGATCCTTCAAAGAGTACTGGAAGTTTTTCTGCAATTGCTGGTTCTGTTGGCTATATTCCTCCAGAGTATGCATACACAATGAGAGTGACGATGGCGGGGAATGTGTACAGCTTTGGGGTAATCCTGCTTGAGTTGTTAACGGGAAAGCCAGCAGTGAGTGATGGAACTGAATTGGTGAAGTGGGTGATGCGCAACTCGACGAAGCAAGAACACATTCTGGATTTTAATGTCAGTAAAACTTCTCAGGCTGTCAAAACCCAGATGCTTGCAATCCTTCGGATAGCTCTTGCCTGTGTCAGTGCATCCCCTGAAGCAAGACCAAAGATGAAGAGTGTGCTCCGGATGCTCCTGACTGCACGTTAA 2850 0.4246 MARYDCISSVLFVALCFWFCPMVLSELSQNQTNTMTTLSQRLDGTGLTDSWNIDTNPHPCKWEGVDCDRTNSSIIQFRLSGYSISSSEFLTLLCQIESLQHLDLSRNILSSIPDKFITDCGKVEGLKLLNFSRNDIRGPLPTFRGFDGLESLDMSFNSFSGKIDSELAGLASLKSLNLSTNFFNGSLPTKLGNSSALDQLVLSGNQFEGTIPAEILSYTNLTLLDLQQNKLSGSIPSIIGDLSKLETLILSSNLLGGEVPSALSNIKALFRFAANENDFTGFVPSGITRFLNNLDLSYNKLSGPIPADLFSHSNLVSVDLSYNSLSGPLPADISSSIIRLRLGGNSLNGTIPSKPFVTALSMTYIELEANNLTGQIPVEVGSRQSLALLNLAHNRLSGELPAELGKLSNLQVLQLQGNKLSGQIPTEVAQLQKLSTLNLSDNSLNGTIPPAMFNLAKLNKLYLQQNNLSGAILTSISGMDSLIELQLGENQLSGLIPKMPSNLQIALNLSSNLFIGPIPSTLAGLNKLEILDLSNNKFNGKIPDFLTRMPALTHLELSKNELYGVIPDFNSHVKVDSDGNNGLLNKTATSNISPGSSKGNPVVVAVLVAIAAAVFLVGLVTVLAVLISRRLYRVKDEHLQPPEDPQPPKVIQGNLLTPNGIHRSNIDFSKAMKDVAETSNITLKTRFSTYYKTIMPSGSIYFVKKLNWSEKLFPLGSHDKFGKEIEVLAKLNNSNVMTPLAYVLSADSAYILYEFMSNGSLYDALHGSMGSSLDWASRYSIAVGAAQGLSFLHGFTSGPILLLDLSSKSIMLKSLKEPLVGDIELYKVIDPSKSTGSFSAIAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPAVSDGTELVKWVMRNSTKQEHILDFNVSKTSQAVKTQMLAILRIALACVSASPEARPKMKSVLRMLLTAR 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0054 949 SUPERFAMILY L domain-like 55 332 - -
Lele46g0054 949 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 756 949 - -
Lele46g0054 949 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 644 755 - -
Lele46g0054 949 SMART LRR_typ_2 242 266 IPR003591 -
Lele46g0054 949 SMART LRR_typ_2 170 194 IPR003591 -
Lele46g0054 949 SMART LRR_typ_2 407 430 IPR003591 -
Lele46g0054 949 SMART LRR_typ_2 479 502 IPR003591 -
Lele46g0054 949 SMART LRR_typ_2 96 119 IPR003591 -
Lele46g0054 949 SMART LRR_typ_2 525 549 IPR003591 -
Lele46g0054 949 SMART LRR_typ_2 431 455 IPR003591 -
Lele46g0054 949 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 332 594 - -
Lele46g0054 949 Pfam Leucine rich repeat N-terminal domain 42 68 IPR013210 -
Lele46g0054 949 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 190 283 - -
Lele46g0054 949 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 29 189 - -
Lele46g0054 949 CDD STKc_IRAK 684 945 - -
Lele46g0054 949 Gene3D Ribonuclease Inhibitor 506 587 IPR032675 -
Lele46g0054 949 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Lele46g0054 949 Pfam Protein tyrosine and serine/threonine kinase 718 945 IPR001245 GO:0004672|GO:0006468
Lele46g0054 949 SUPERFAMILY Protein kinase-like (PK-like) 687 945 IPR011009 -
Lele46g0054 949 Gene3D Phosphorylase Kinase; domain 1 662 755 - -
Lele46g0054 949 Gene3D Transferase(Phosphotransferase) domain 1 756 949 - -
Lele46g0054 949 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Lele46g0054 949 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Lele46g0054 949 Pfam Leucine rich repeat 507 562 IPR001611 GO:0005515
Lele46g0054 949 PRINTS Leucine-rich repeat signature 291 304 - -
Lele46g0054 949 PRINTS Leucine-rich repeat signature 525 538 - -
Lele46g0054 949 SUPERFAMILY RNI-like 260 567 - -
Lele46g0054 949 Gene3D Ribonuclease Inhibitor 383 505 IPR032675 -
Lele46g0054 949 Gene3D Ribonuclease Inhibitor 288 382 IPR032675 -
Lele46g0054 949 Gene3D Ribonuclease Inhibitor 187 287 IPR032675 -
Lele46g0054 949 Gene3D Ribonuclease Inhibitor 30 186 IPR032675 -
Lele46g0054 949 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 166 287 - -
Lele46g0054 949 ProSiteProfiles Protein kinase domain profile. 676 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0054 Lele-ChrLele46 290447 293524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0054 149 945 Receptor kinase-like Gene Family AT2G41820 38.849 1.03e-151 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele46g0054 PK_Tyr_Ser-Thr 1.1e-22 CL0016