Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0047 ATGCAAGAGATGTTGAGTAGTCGTGCTTCATTCAATGCTACAGAGATTTCTGTTTGCGCAATTGCGTTCGGTGGCTCTCCAAGCTGTAGTAGTCCCACAAACCGCCCCAAAACTGCCTCCGACAATTGCTTCATTCACACTATTTCTCGTTTGATGAAGCAAGCCCCACCAGCTATAGATGTAACTATCCCCATTGCAAGAGTAGGTCCCATTTATGATAGAACATCATCATCATCTTCTTCTTCTCATCCCTCACCTTCCAATGGCTTCTTTGCTGCGGCTGAGAGACCAAGCATGGAGATGGAATCTTGTGTTCCACCGGGGTTTAGGTTTCGTCCGACAGAGGAAGAACTTGTAGGGTACTACCTCAAGAGGAAGATAAACTCGTTGAAAATCGATCTAGATGTTATTGCAGAGATCGATCTCTACAAAATTGAACCATGGGACATTCAAGATAAATGCAAGATGGGGTACGAGGAAGAGAAGGAGTGGTATTTCTTCAGTCACAAGGATAAAAAATACCCAACAGGGACGAGAACAAACAGAGCGACAGCAGCAGGTTTCTGGAAAGCAACGGGAAGGGACAAGGCAGTGATGTCCAAGAAGAACAGAATCATAGGCATGAGGAAGACCCTAGTCTTCTACAAGGGACGTGCCCCTTATGGCTCCAAGACCGATTGGATTATGCATGAATTTCGCCTCCAAACTTCCCAACACACCCCTCATCCTCAGGAAGAAGGATGGGTGGTGTGCCGAGCATTCAAGAAACCTAGTCCTACTCAGCACAGACCAAGTTTCGAATGTTGGAGTGGCCAAGCGCATTTTTTCAGGAACCAGATAAGCAATACCACAAGACCTCAGTCTCTATCATTTACCAACGAAACCCTAAATCCGGTGCTTTATCCAGCTAATGAAGGAACAAGCTTTAGCGATGCCTTCACTTCGAATCATCATCACCAACTGTTTCTGCCAAACGATGCCGTTTTGGACGACCACAACAACAACGGCCAGCTTGTTGAGCTCATTCCACAGCTAGATAGCCCCACGGCTTCTCTATCAGCTAGAGCAGTGAAACAAAATGGCTTCACAAATGAAGACAATTACAGTCAAGAAAGGACCAATAATAACAACGTTAACGATGGCCAAGGCATTGATTGGAAGAGCTTGGACAACTTGTTATCTTCACAGTTCGCAGATGATACTGCCGCTGCTGATTATTTTTCTCATCCAAACATGCCCTTGATGCCACAAACTAGTCATGACCTACAAGTATTGCAACCTCAAAATCACCAAGCGAGCCATGTTCTGGGATGCTTCCCTGATTCATAA 1329 0.4545 MQEMLSSRASFNATEISVCAIAFGGSPSCSSPTNRPKTASDNCFIHTISRLMKQAPPAIDVTIPIARVGPIYDRTSSSSSSSHPSPSNGFFAAAERPSMEMESCVPPGFRFRPTEEELVGYYLKRKINSLKIDLDVIAEIDLYKIEPWDIQDKCKMGYEEEKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKKNRIIGMRKTLVFYKGRAPYGSKTDWIMHEFRLQTSQHTPHPQEEGWVVCRAFKKPSPTQHRPSFECWSGQAHFFRNQISNTTRPQSLSFTNETLNPVLYPANEGTSFSDAFTSNHHHQLFLPNDAVLDDHNNNGQLVELIPQLDSPTASLSARAVKQNGFTNEDNYSQERTNNNNVNDGQGIDWKSLDNLLSSQFADDTAAADYFSHPNMPLMPQTSHDLQVLQPQNHQASHVLGCFPDS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0047 442 SUPERFAMILY NAC domain 101 256 IPR036093 GO:0003677|GO:0006355
Lele46g0047 442 Gene3D NAC domain 114 259 IPR036093 GO:0003677|GO:0006355
Lele46g0047 442 ProSiteProfiles NAC domain profile. 105 256 IPR003441 GO:0003677|GO:0006355
Lele46g0047 442 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 102 355 - -
Lele46g0047 442 FunFam Nac domain-containing protein 86 114 259 - -
Lele46g0047 442 Pfam No apical meristem (NAM) protein 106 234 IPR003441 GO:0003677|GO:0006355
Lele46g0047 442 MobiDBLite consensus disorder prediction 361 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0047 Lele-ChrLele46 242506 251845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0047 101 442 NAC Transcription Factor Family AT1G71930 49.719 8.74e-104 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele46g0047 NAM 3.6e-36 No_clan