Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0044 ATGCACCATCTGTCGGAGCACCCGAATGTGGTTCGGATACAAGGGACGTACGAGGACGCCGTGTTTGTGCACCTGGTTATGGAGCTGTGTGCTGGGGGTGAGCTGTTTGATAGGATTATTCAGAAGGGGCATTACAGTGAGAGAGAGGCGGTCAAGTTGATAAAGACCATTGTTGGCGTGGTCGAAGCTTGTCACTCTCTTGGGGTAATGCACAGGGATCTCAAGCCTGAGAATTTCCTGTTTGATAGTTCTTGTGACGATGCTCAGATGAAGGCTACGGATTTTGGCCTCTCTGTCTTTTACAGGCCAGGACAAACCTTTTCCGATGTAGTTGGAAGCCCCTACTATGTTGCCCCTGAGATTTTGTGCAAGCGTTATGGACAAGAAGCAGATGTATGGAGTGCAGGAGTTATCCTTTACATCTTGCTGAGTGGGGTCCCACCTTTTTGGGCCGAAACTGAACCAGGCATCTTCAGGCACATTTTACAAGGAAAGCCAGATTTTCAATCTGACCCATGGCCAAGCATATCAGAATGTGCTAAAGATTTGGTGAGCAAAATGCTAGAGAAGGACCCTAGGAAAAGAATTTCTGCCCATGAAGTCTTGTGTCACCCTTGGATAAATGATGATAATGTTGCCCCTGACAAACCTCTGGATTCCGCAGTTTTATCCCGTCTGAAACAGTTCTCAGCTATGAATAAAGTCAAGAAGATGGCTTTACGGGTGATAGCAGAAAGACTTTCAGAAGAAGAAATAGGTGGTTTAAAAGAGTTGTTCATGATGATTGACACAGACAACAGTGGGACTATAACATTTGAGGAACTCAAAGAAGGTCTAAGAAGAGTTGGTTCTGATCTAATGGAATCCGAAATTAAATCCCTAATGGATGCGGCTGACATAGACCAAAGTGGAACAATTGACTATGGTGAATTTCTTGCTGCCACACTGCACATGAATAAGATGGAAAGAGAGGAGAATTTAGCTGCAGCATTTTCCTATTTTGACAAAGATGGTAGTGGATACATCACCATTGATGAGCTTCAACTGGCTTGTAAAGAGTTTGGCTTGGGTGACGTGAATCCAGATGTTATGTCAGAGATTGATCTAGACAATGATGGGAGAATTGATTATGGGGAGTTTGTAGCAATGATGAAGCAGGGAGAGGGAGGGGTTGGCAGCAGCAGAACCACAAGAGGCAATTTGAACTTCAATATAGCAGATGCCTTCCAACAAGTAAATGACTCATCCTGA 1251 0.4444 MHHLSEHPNVVRIQGTYEDAVFVHLVMELCAGGELFDRIIQKGHYSEREAVKLIKTIVGVVEACHSLGVMHRDLKPENFLFDSSCDDAQMKATDFGLSVFYRPGQTFSDVVGSPYYVAPEILCKRYGQEADVWSAGVILYILLSGVPPFWAETEPGIFRHILQGKPDFQSDPWPSISECAKDLVSKMLEKDPRKRISAHEVLCHPWINDDNVAPDKPLDSAVLSRLKQFSAMNKVKKMALRVIAERLSEEEIGGLKELFMMIDTDNSGTITFEELKEGLRRVGSDLMESEIKSLMDAADIDQSGTIDYGEFLAATLHMNKMEREENLAAAFSYFDKDGSGYITIDELQLACKEFGLGDVNPDVMSEIDLDNDGRIDYGEFVAMMKQGEGGVGSSRTTRGNLNFNIADAFQQVNDSS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0044 416 Gene3D Transferase(Phosphotransferase) domain 1 35 218 - -
Lele46g0044 416 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
Lele46g0044 416 CDD EFh 327 385 IPR002048 GO:0005509
Lele46g0044 416 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Lele46g0044 416 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Lele46g0044 416 FunFam Calcium-dependent protein kinase SK5 35 219 - -
Lele46g0044 416 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0044 416 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Lele46g0044 416 CDD STKc_CAMK 1 206 - -
Lele46g0044 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Lele46g0044 416 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 380 - -
Lele46g0044 416 CDD EFh 255 314 IPR002048 GO:0005509
Lele46g0044 416 Pfam EF-hand domain pair 325 385 IPR002048 GO:0005509
Lele46g0044 416 Pfam EF-hand domain pair 255 315 IPR002048 GO:0005509
Lele46g0044 416 ProSiteProfiles EF-hand calcium-binding domain profile. 362 390 IPR002048 GO:0005509
Lele46g0044 416 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Lele46g0044 416 ProSitePatterns EF-hand calcium-binding domain. 368 380 IPR018247 -
Lele46g0044 416 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0044 416 FunFam Calcium-dependent protein kinase 1 215 388 - -
Lele46g0044 416 Pfam Protein kinase domain 2 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0044 416 Gene3D - 219 387 - -
Lele46g0044 416 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Lele46g0044 416 SMART efh_1 358 387 IPR002048 GO:0005509
Lele46g0044 416 SMART efh_1 254 282 IPR002048 GO:0005509
Lele46g0044 416 SMART efh_1 326 354 IPR002048 GO:0005509
Lele46g0044 416 SMART efh_1 290 318 IPR002048 GO:0005509
Lele46g0044 416 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Lele46g0044 416 SUPERFAMILY EF-hand 236 388 IPR011992 -
Lele46g0044 416 SUPERFAMILY Protein kinase-like (PK-like) 1 228 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0044 Lele-ChrLele46 222428 225227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0044 1 409 EF-hand Containing Proteins AT1G35670 83.171 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele46g0044 Pkinase 9.5e-59 CL0016