Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0039 ATGCACGTTGAGGCTCAGGGTTCTCATGGAAGGTGTTTTGAAGGTGTTTTGCTTTTGCATTCAGAGATGATGGCAAAGGAAGAAGATCAGGTCAAAGGGACTCCAAAAGGGCACTTTGTGGTGTATTTGGGGATTGAAATGGAAAGATTTGTGGTTCCTATAACATACCTAAAGAATCCTATGTTTCAGAGATTGCTAGACAAAGCTGCTGATGAGTTTGGCTTTGATAATCCCAATGAGATTGTTCTGCCTTGTGATGCTTCTTCTTTCAGAACACTTATTGCTCTTTTCGACAAGTGCAACTGTCCTTAG 312 0.4135 MHVEAQGSHGRCFEGVLLLHSEMMAKEEDQVKGTPKGHFVVYLGIEMERFVVPITYLKNPMFQRLLDKAADEFGFDNPNEIVLPCDASSFRTLIALFDKCNCP 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0039 103 Pfam Auxin responsive protein 28 96 IPR003676 GO:0009733
Lele46g0039 103 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0039 Lele-ChrLele46 175610 177220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0039 35 94 Calmodulin-binding Proteins AT5G20810 43.333 6.58e-16 67.8