Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0030 ATGATTACTGGGACATCCCAAGCTGACTGTGCTGTTCTTATCATTGATTCCACGACTGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGACAGACCCGTGAGCATGCTCTCCTTGCTTTCACTCTTGGTGTCAAGCAAATGATCTGTTGCTGCAACAAGATGGATGCTACTACTCCCAAGTACTCCAAGGCCAGGTATGATGAAATTGTCAAGGAAGTATCTTCATACTTGAAGAAGGTTGGTTACAACCCAGACAAAATTCCATTTGTTCCTATATCTGGTTTTGAGGGGGACAACATGATTGAGAGGTCGACCAACCTTGATTGGTACAAGGGTCCAACCCTACTTGATGCCCTTGATCAGATCCAGGAGCCAAAGAGACCATCAGACAAGCCTCTTCGATTGCCCCTTCAAGATGTCTACAAGATTGGAGGAATAGGCACCGTCCCAGTGGGACGTGTTGAGACTGGTGTCCTGAAGCCTGGCATGGTTGTGACTTTTGGTCCTAGTGGACTGACAACTGAAGTTAAGTCTGTGGAGATGCACCATGAGGCTCTCCAGGAGGCCCTTCCTGGTGACAATGTGGGATTCAATGTTAAGAATGTTGCAGTTAAGGATCTTAAGCGTGGATATGTTGCCTCAAATTCTAAGGATGACCCTGCCAAGGAGGCTGCCAGCTTCACATCTCAAGTTATCATAATGAACCACCCTGGTCAGATTGGAAATGGTTATGCCCCGGTGCTTGATTGCCACACTTCCCACATTGCTGTCAAGTTTGCTGAAATTTTGACTAAGATTGATAGGCGATCTGGTAAGGAGCTTGAGAAGGAGCCTAAATTCTTGAAGAATGGTGATGCGGGTTTTGTGAAGATGTTTCCCACCAAGCCTATGGTTGTTGAAACTTTCTCTGAGTATCCTCCTCTAGGTCGTTTTGCTGTGAGGGACATGCGTCAAACGGTTGCTGTGGGAGTCATCAAGAGCGTGGAGAAGAAAGACGCTACTTCAGCCAAGATCACCAAGGCTGCACAGAAGAAGGGCAAATGA 1044 0.4684 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMFPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDATSAKITKAAQKKGK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0030 347 SUPERFAMILY Translation proteins 125 220 IPR009000 -
Lele46g0030 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 148 IPR027417 -
Lele46g0030 347 FunFam Elongation factor 1-alpha 128 215 - -
Lele46g0030 347 Pfam Elongation factor Tu GTP binding domain 1 121 IPR000795 GO:0003924|GO:0005525
Lele46g0030 347 Gene3D Translation factors 222 329 - -
Lele46g0030 347 Pfam Elongation factor Tu C-terminal domain 220 328 IPR004160 -
Lele46g0030 347 PANTHER TRANSLATION FACTOR 1 332 - -
Lele46g0030 347 Pfam Elongation factor Tu domain 2 147 212 IPR004161 GO:0005525
Lele46g0030 347 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 225 328 IPR009001 -
Lele46g0030 347 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 129 IPR000795 GO:0003924|GO:0005525
Lele46g0030 347 CDD EF1_alpha_III 222 325 - -
Lele46g0030 347 FunFam Elongation factor 1-alpha 222 329 - -
Lele46g0030 347 CDD EF1_alpha_II 129 219 - -
Lele46g0030 347 Gene3D Translation factors 128 215 - -
Lele46g0030 347 Gene3D - 1 123 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0030 Lele-ChrLele46 139251 140404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0030 1 339 Eukaryotic Initiation Factors Gene Family AT5G60390 94.395 0.0 667