Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0012 ATGGGTTGTGATTTCCCCACGTCACTCGTTCCCGGCTTCCGATTCCACCCCACCGACGAAGAACTCGTTCGTTACTACCTCACACGCAAGGTCTCCGGCAAATCCTTTCGCTTCGATCCCATCGCAGTCATCGACATCTATAAATCCGAACCCTGGGACCTCCCATGTCAGTCGAAGCTGGAAAGCAAGGACTTGGAGTGGTACTTCTTCAGTGCGCTGGACATAAAGTATGGAAATGGGTCGAGGACGAATCGGGCTACTGAGAAAGGATACTGGAAGACTACGGGCAAGGATCGCCCAGTCCGACACAGCTCTCGTACCGTCGGAATGAAGAAGACCCTAGTTTATCATAGTGGGCGGGCTCCGCGCGGTGCCCGTACCAATTGGGTCATGCACGAATACAAATTAGCCGATGAAGAATTGGCAAAAGCAGGAATACCACAGGATGCGTTTGTGCTCTGTAGGATTTTCCAGAAGAGTGGTACTGGGCCAAAGAATGGGGAGCAGTATGGTGCCCCCTTTATAGAGGAGGAATGGGAAGATGATGATGTTGCCTTGGCTCCACTGCCCAGTGATGAGGCTGCAACTGATGAAATAATGGTCCGTGATGATGCTTTTGTTGAAACCGATAACCTTGACCAGTACCTTGATATGGGTGTGGCATCCGAAGGTGCTGGTCATGCATTAAACTTCTATCATGGGGAATGCAGCAGTTATCCTGAGCATCCCCAAGAATTGATTGAAGATCAAAAGCCCTTGGTAGGAACTGCTGAAACTTGTGAGTCTCGAGATGACCTTTTATTGGATAGGCATGAGCAACATGGTTCAGATAGCAAACCAGTGAAAGATGGCATCAAGGCTGAAGCTAGTCATGAAGGATATTTCTTGAATCACAATTGCTCATTTGATGAGACATACTTGGATGCCACTGATGGATCATTCCTGGAAACCGATGATCTGGTGAATCCTGCTGAGACAGATGCTGCTGATACTGATGTACTAGAAGAGTATCTTACGTACTTTAATGATGCTGATGATATTTCCCAGTATATCTCTTTCGATTCTCCTGAGTTGGCAGGTAGTGAAAACCCTGATGCTGACCAAGGACCACCTTTAACCCAACTGAATGTTGGTGGAGAGTCAAAGGATATGGCAAGTAAAATTGATGCGGAAGACCATTCTAGTGAAGAAGCTTCTTTGAAGCAGCATCTCGAGGCATCAAAAGTGGTGTCAGGAAATACATACCCATTTATGAAGCAGGCCAGTCACTTGTTGGGCTGCACCCCTGCTTCCCCTGTATTTACTTCGGAGTTTCCTCCTAAAGAAATTGCTCTTCGCCTTCATTCCACGGGTCAATGTTCCAATTCAGCTCATGTAACTGCAGGCATGATCAGAGTAACTGACTTTACTGCGACAGGCAACATAATGGACTGGATGCTGGGCAAAAATGGAGAGTTCAGTGTTGTAATCTCATCTTGCTTTTGGCCTGATGTTAACTCCGTTGCTTTAGTGCCCATTTCTGGTTTACTCTCTGGGAAGCCTGCATTTGTAGGGTCAAACGGCTGGATTTACTTAGTCTTCTTTTCAGTGCTGATTCTTTCGCTGAGTTTCAATATTGGAAGTTTCATGTATACAACAAGTAAATGA 1647 0.4645 MGCDFPTSLVPGFRFHPTDEELVRYYLTRKVSGKSFRFDPIAVIDIYKSEPWDLPCQSKLESKDLEWYFFSALDIKYGNGSRTNRATEKGYWKTTGKDRPVRHSSRTVGMKKTLVYHSGRAPRGARTNWVMHEYKLADEELAKAGIPQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWEDDDVALAPLPSDEAATDEIMVRDDAFVETDNLDQYLDMGVASEGAGHALNFYHGECSSYPEHPQELIEDQKPLVGTAETCESRDDLLLDRHEQHGSDSKPVKDGIKAEASHEGYFLNHNCSFDETYLDATDGSFLETDDLVNPAETDAADTDVLEEYLTYFNDADDISQYISFDSPELAGSENPDADQGPPLTQLNVGGESKDMASKIDAEDHSSEEASLKQHLEASKVVSGNTYPFMKQASHLLGCTPASPVFTSEFPPKEIALRLHSTGQCSNSAHVTAGMIRVTDFTATGNIMDWMLGKNGEFSVVISSCFWPDVNSVALVPISGLLSGKPAFVGSNGWIYLVFFSVLILSLSFNIGSFMYTTSK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0012 548 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Lele46g0012 548 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lele46g0012 548 FunFam Nac domain-containing protein 86 18 162 - -
Lele46g0012 548 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Lele46g0012 548 SUPERFAMILY NAC domain 8 159 IPR036093 GO:0003677|GO:0006355
Lele46g0012 548 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 240 - -
Lele46g0012 548 MobiDBLite consensus disorder prediction 355 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0012 Lele-ChrLele46 64482 67583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0012 1 539 NAC Transcription Factor Family AT5G04410 44.162 2.44e-137 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele46g0012 NAM 9.8e-36 No_clan